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dear all, I also wanted to use "superpose molecules" and I had the same failure message. As I'm working on Windows, maybe this problem only exists in a windows operating system? For superposing molecules there are a lot of programs. The reason I'm using this CCP4 program is that I would like to have an output graph of RMSD for each residue of the two molecules. Does anyone know another progam to do this? many thanks, Petra ----- Original Message ----- From: "fang sheng" <[EMAIL PROTECTED]> To: <[email protected]> Sent: Thursday, August 24, 2006 5:52 PM Subject: [ccp4bb]: TOP : "garbage on line" ? > *** For details on how to be removed from this list visit the *** > *** CCP4 home page http://www.ccp4.ac.uk *** > > > Hello, All, > > I am trying to use program "TOP"( TOPP in latest version of CCP4) to compare > two similar structures and that is what I see in the log file when it fails. > " garbage on line". If you have any experience dealing with this kind of > problem or any idea about how to fix it, please tell me and it is greatly > appreciated. > > another question is does anybody know where to get SHP program? I see from > paper people use it to do structual comparison. Wondering if it is better > than TOPP. > > best > > Fang Sheng > > _________________________________________________________________ > Check the weather nationwide with MSN Search: Try it now! > http://search.msn.com/results.aspx?q=weather&FORM=WLMTAG > >
