No conspiracy here, but we have had a rough April thus far
with MolProbity. We are having many "hung jobs" which we
haven't addressed administratively (iow process killing).
Right now, we're doing this manually and trying to
determine reasons behind the "hangs".
On Thu, Apr 10, 2008 at 10:17 AM, Mark J. van Raaij
<[EMAIL PROTECTED]> wrote:
Dear All,
There seems to be some anti-validation conspiracy going on:
I would like to run Molprobity (http://molprobity.biochem.duke.edu/), but with
the following result:
Safari can't open the page "http://molprobity.biochem.duke.edu/"; because the
server unexpectedly dropped the connection, which sometimes occurs when the
server is busy. You might be able to open the page later.
When trying WhatCheck (http://biotech.embl-ebi.ac.uk:8400/), the result is:
The Biotech service is discontinued due to hardware retirement outside our
control. We apologize for the inconvenience this might cause.
Then trying Procheck (ok, I know, the previous two are more up-to-date) from
CCP4 6.0.2 locally (installed yesterday!), the program hangs indefintely in
the >"proclean" step...
Who's behind this, the authors of a fourth validation suite?
Mark
PS the authors of the validation program who first fix their problems will most
likely earn the citation in the paper we are writing...
Mark J. van Raaij
Dpto de Bioquímica, Facultad de Farmacia
Universidad de Santiago
15782 Santiago de Compostela
Spain
http://web.usc.es/~vanraaij/
--
Bryan Arendall
Richardson Lab - Duke University
kinemage.biochem.duke.edu
919-681-8827
