On Tue, May 13, 2014 at 9:20 PM, Felix Frolow <[email protected]>wrote:
> Phenix does even more, it adds TER after ions and ligands, so again manual > messing is needed. > However they may have a jiffy to fix it. > phenix.sort_hetatms will remove them for you, although why this "problem" was apparently beyond the capability of the PDB itself to handle is a mystery. When I encountered this a couple of years ago I spent longer arguing with the annotator than writing the code. Fortunately mmCIF deposition does indeed seem to work more smoothly. -Nat
