Hi Andrew, Have you tried setting the ulimit to unlimited in your .bashrc or .cshrc profile, whichever you use? The command is something like this: ulimit -a unlimited
That should take care of the segmentation fault. -Gyan On Tue, Jul 7, 2020 at 8:47 AM Andrew Sharff <asha...@globalphasing.com> wrote: > Dear All, > > Since moving to ccp4 7.1 (and Coot 0.9), we have been seeing several > issues on MacOS with some of our utility programs, which start Coot with > both distributed and automatically generated Coot scheme > scripts. > > These issues range from Coot not acting on commands in the scheme scripts > (and not reporting any errors or warning messages) to crashing with > segmentation faults. > > These problems only affect MacOS - they all work perfectly on Linux - and > only with the latest version of Coot (0.9). We have tested and see the > same behaviour on machines running MacOS 10.13, 10.14 and > 10.15. > > We have also tried the Coot 0.9 binary that is distributed in ccp-em but > in this case, it crashes with a segmentation fault every time on MacOS. > > Has anyone else encountered any unexpected behaviour / probems running > Coot 0.9 with scheme input scripts and if so, do you have any insight into > what the problems (and better still, solutions) are? > > > Best wishes > > Andrew Sharff > > | Dr Andrew Sharff | > | Global Phasing Ltd., Cambridge UK | > | http://www.globalphasing.com > > ######################################################################## > > To unsubscribe from the COOT list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 > > This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing > list hosted by www.jiscmail.ac.uk, terms & conditions are available at > https://www.jiscmail.ac.uk/policyandsecurity/ > -- Gyanendra Kumar https://www.linkedin.com/in/gyanendrakumar https://scholar.google.com/gyanendrakumar <https://scholar.google.com/citations?user=lnil0IQAAAAJ&hl=en> ------------------------------------------------------- ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
