Hi Sean,
What was the issue in 2.5?  Just want to make sure this is also fixed in the 
upcoming 3.0 release coming out of ASF as well... Jira#?



On Nov 15, 2012, at 7:59 PM, "Murphy, Sean P." <[email protected]> wrote:

> I was able to see an issue with the 'PAD term spotter' which will most likely 
> be related to the problem you're seeing with the smoking status as well.    
> The problem seems to have  stemmed from the reorganization of the path 
> structures with the latest cTAKES  release.  Due to time and resource 
> constraints we were not able to test each project independently.   
> 
> I will open a bug report against these problems and provide a fix as soon as 
> possible.  I will keep you posted, but I hope to have this resolved in a few 
> days.
>    Thanks,
>        ~Sean
> 
> -----Original Message-----
> From: [email protected] 
> [mailto:[email protected]] On 
> Behalf Of Coarr, Matt
> Sent: Thursday, November 15, 2012 12:22 PM
> To: [email protected]
> Cc: [email protected]
> Subject: Re: Regarding Assertion Tagger
> 
> You were looking in the right place Deepal! The "cTAKES 2.5 Component Use 
> Guide" (the link at the bottom of your email) has a link to more information 
> about the assertion module.
> 
> Assertion module info:
> 
>  https://wiki.nci.nih.gov/display/VKC/cTAKES+2.5+-+Assertion
> 
> I'm not familiar with the peripheral artery disease spotter or the simulated 
> prod smoking tae.  So I'll let someone else chime in there.
> 
> Matt
> 
> 
> On 2012-11-15 13:11 , "Deepal Dhariwal" <[email protected]> wrote:
> 
>> Hello Matt,
>> 
>> Thanks for your reply. I am using cTAKES-2.5.0 Binary Version which I 
>> have downloaded from 
>> https://wiki.nci.nih.gov/display/VKC/cTAKES+2.5+User+Install+Instructio
>> ns
>> .
>> I have gone through the cTAKES documentation however no where was it 
>> mentioned that polarity / uncertainty properties are on Entity Mention. 
>> In order to avoid sending repeated mails to the mailing list could you 
>> tell me if there is some other documentation as well ? I am trying to 
>> use Peripheral Artery Disease Spotter , however it returns only 
>> document annotation. Further even the SimulatedProdSmokingTAE Annotator 
>> returns smoking status 'unknown' for every input. Is there some order 
>> in which these annotator need to be executed (Reference :
>> https://wiki.nci.nih.gov/display/VKC/cTAKES+2.5+Component+Use+Guide )
>> 
>> Thanks for clarifying the user list email id.
>> 
>> Regards
>> Deepal Dhariwal
>> 
>> On Thu, Nov 15, 2012 at 12:48 PM, Coarr, Matt <[email protected]> wrote:
>> 
>>> FYI, the user list is ctakes-user (singular).  I've corrected the CC.
>>> 
>>> The polarity/conditional/uncertainty properties are on EntityMention 
>>> and EventMention.
>>> 
>>> Are you using a current development copy of ctakes (from apache svn 
>>> or from 3.0 RC2)?
>>> 
>>> If not, what version of ctakes are you using?  Version number? 
>>> Binary, source zip, or source from svn?
>>> 
>>> Matt
>>> 
>>> 
> 

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