There's a 3.0.0 branch.  The release will be made from there.  So we should 
make the fixes in both trunk and 3.0.0. 


On Nov 15, 2012, at 10:32 PM, "Murphy, Sean P." <[email protected]> wrote:

> Hello Pei,
>    The issue is at 2.5.   When is the 3.0 release freeze?   I will try to 
> propagate the fix forward.
> 
> -----Original Message-----
> From: [email protected] 
> [mailto:[email protected]] On 
> Behalf Of Chen, Pei
> Sent: Thursday, November 15, 2012 3:15 PM
> To: <[email protected]>
> Cc: [email protected]; [email protected]
> Subject: Re: Regarding Assertion Tagger
> 
> Hi Sean,
> What was the issue in 2.5?  Just want to make sure this is also fixed in the 
> upcoming 3.0 release coming out of ASF as well... Jira#?
> 
> 
> 
> On Nov 15, 2012, at 7:59 PM, "Murphy, Sean P." <[email protected]> wrote:
> 
>> I was able to see an issue with the 'PAD term spotter' which will most 
>> likely be related to the problem you're seeing with the smoking status as 
>> well.    The problem seems to have  stemmed from the reorganization of the 
>> path structures with the latest cTAKES  release.  Due to time and resource 
>> constraints we were not able to test each project independently.   
>> 
>> I will open a bug report against these problems and provide a fix as soon as 
>> possible.  I will keep you posted, but I hope to have this resolved in a few 
>> days.
>>   Thanks,
>>       ~Sean
>> 
>> -----Original Message-----
>> From: [email protected] 
>> [mailto:[email protected]
>> g] On Behalf Of Coarr, Matt
>> Sent: Thursday, November 15, 2012 12:22 PM
>> To: [email protected]
>> Cc: [email protected]
>> Subject: Re: Regarding Assertion Tagger
>> 
>> You were looking in the right place Deepal! The "cTAKES 2.5 Component Use 
>> Guide" (the link at the bottom of your email) has a link to more information 
>> about the assertion module.
>> 
>> Assertion module info:
>> 
>> https://wiki.nci.nih.gov/display/VKC/cTAKES+2.5+-+Assertion
>> 
>> I'm not familiar with the peripheral artery disease spotter or the simulated 
>> prod smoking tae.  So I'll let someone else chime in there.
>> 
>> Matt
>> 
>> 
>> On 2012-11-15 13:11 , "Deepal Dhariwal" <[email protected]> wrote:
>> 
>>> Hello Matt,
>>> 
>>> Thanks for your reply. I am using cTAKES-2.5.0 Binary Version which I 
>>> have downloaded from 
>>> https://wiki.nci.nih.gov/display/VKC/cTAKES+2.5+User+Install+Instruct
>>> io
>>> ns
>>> .
>>> I have gone through the cTAKES documentation however no where was it 
>>> mentioned that polarity / uncertainty properties are on Entity Mention.
>>> In order to avoid sending repeated mails to the mailing list could 
>>> you tell me if there is some other documentation as well ? I am 
>>> trying to use Peripheral Artery Disease Spotter , however it returns 
>>> only document annotation. Further even the SimulatedProdSmokingTAE 
>>> Annotator returns smoking status 'unknown' for every input. Is there 
>>> some order in which these annotator need to be executed (Reference :
>>> https://wiki.nci.nih.gov/display/VKC/cTAKES+2.5+Component+Use+Guide )
>>> 
>>> Thanks for clarifying the user list email id.
>>> 
>>> Regards
>>> Deepal Dhariwal
>>> 
>>> On Thu, Nov 15, 2012 at 12:48 PM, Coarr, Matt <[email protected]> wrote:
>>> 
>>>> FYI, the user list is ctakes-user (singular).  I've corrected the CC.
>>>> 
>>>> The polarity/conditional/uncertainty properties are on EntityMention 
>>>> and EventMention.
>>>> 
>>>> Are you using a current development copy of ctakes (from apache svn 
>>>> or from 3.0 RC2)?
>>>> 
>>>> If not, what version of ctakes are you using?  Version number? 
>>>> Binary, source zip, or source from svn?
>>>> 
>>>> Matt
>>>> 
>>>> 
>> 

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