Thanks Melanie. I will try again.
Martin
On 27/06/2013 18:01, Melanie Courtot
wrote:
Hi Martin,
I just tried with a small test db and was unable to reproduce your case, even with the #.
I attach the SQL and mapping file I am using as well as the output, produce with the command ./dump-rdf -f RDF/XML -b "http://purl.org/test/" -o testMapping.owl testMapping.ttl
As you can see in the output, it creates classes with URI of type <rdf:Description rdf:about="1"> (the base URI being defined as xml:base="http://purl.org/test/", this would be expanded as http://purl.org/test/1) and classes with an absolute URI such as <rdf:Description rdf:about="http://purl.obolibrary.org/obo#testName1">
Cheers,
Melanie
On 2013-06-27, at 9:42 AM, martin roberts wrote:
Hi Melanie
In our case we have used the second format but with the following style of url
http://purl.obolibrary.org/obo#ObjectName_@@data.code@@
I am wondering as we have used # in the uri whether Jena has taken this to be wrong for the dump. It works if I run the server but not if I use dump.
Martin
On 27/06/2013 17:37, Melanie Courtot wrote:
Hi Martin,
Do you have a small example?
I use both a relative URI with d2rq:uriPattern "@@positiveData.key_ID|urlify@@" and an absolute URI with d2rq:uriPattern "http://purl.obolibrary.org/obo/@@data.code@@" in the same mapping file, and I get the expected output, i.e. in the first case my base URI is prepended, while in the second the URI is kept as is.
I use dump-rdf -b "my-base-uri".
Cheers,
Melanie
On 2013-06-27, at 7:46 AM, martin roberts wrote:
Hi
can you explain why the dump-rdf feature does not use the uriPattern
properties for generate the full URI for the objects extracted, but
instead uses the base uri passed in?
Is there a way to make this work?
Martin
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Mélanie Courtot
Ph.D. Candidate,
BCCRC - Terry Fox Laboratory - 12th floor
675 West 10th Avenue
Vancouver, BC
V5Z 1L3, Canada
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