Emmanuel,
what's the PETSc version you have installed? I wonder whether the PETSc
interfaces have changed again.
Best
W.
On 3/27/21 12:24 AM, Emmanuel Yarleque Medina wrote:
Hello everyone:
I'm trying to install deal II 9.2.0 on Ubuntu 20.04.2 LTS release with comands:
cmake -DCMAKE_INSTALL_PREFIX=/usr/local -DDEAL_II_WITH_MPI=ON
-DPETSC_DIR=/home/hpc/petsc -DPETSC_ARCH=arch-linux2-c-opt
-DDEAL_II_WITH_PETSC=ON -DMETIS_DIR=/home/hpc/metis-5.1.0/build/Linux-x86_64
-DDEAL_II_WITH_METIS=ON -DP4EST_DIR=/home/hpc/p4est/DEBUG
-DTRILINOS_DIR=/home/hpc/trilinos -DDEAL_II_WITH_TRILINOS=ON
-DDEAL_II_WITH_P4EST=ON -DTrilinos_ENABLE_EXPLICIT_INSTANTIATION=ON ../
and the following error happened:
Scanning dependencies of target obj_non_matching_inst
[ 19%] Generating coupling.inst
[ 19%] Built target obj_physics_elasticity_inst
Scanning dependencies of target obj_sundials_debug
[ 19%] Built target obj_non_matching_inst
Scanning dependencies of target obj_numerics_debug
[ 19%] Building CXX object
source/sundials/CMakeFiles/obj_sundials_debug.dir/arkode.cc.o
[ 19%] Building CXX object
source/numerics/CMakeFiles/obj_numerics_debug.dir/data_out.cc.o
[ 19%] Building CXX object
source/sundials/CMakeFiles/obj_sundials_debug.dir/ida.cc.o
In file included from /home/hpc/petsc/include/petscsf.h:7,
from /home/hpc/petsc/include/petsc.h:12,
from
/home/hpc/dealII/dealii-9.2.0/include/deal.II/fe/fe_values.h:52,
from
/home/hpc/dealII/dealii-9.2.0/source/numerics/data_out.cc:23:
/home/hpc/petsc/include/petscis.h:216:47: error: expected initializer before
‘ISColoringValue’
216 | typedef unsigned PETSC_IS_COLORING_VALUE_TYPE ISColoringValue;
| ^~~~~~~~~~~~~~~
/home/hpc/petsc/include/petscis.h:219:65: error: ‘ISColoringValue’ has not
been declared
219 | PETSC_EXTERN PetscErrorCode
ISAllGatherColors(MPI_Comm,PetscInt,ISColoringValue*,PetscInt*,ISColoringValue*[]);
|
^~~~~~~~~~~~~~~
/home/hpc/petsc/include/petscis.h:219:92: error: ‘ISColoringValue’ has not
been declared
219 | PETSC_EXTERN PetscErrorCode
ISAllGatherColors(MPI_Comm,PetscInt,ISColoringValue*,PetscInt*,ISColoringValue*[]);
|
^~~~~~~~~~~~~~~
/home/hpc/petsc/include/petscis.h:221:79: error: ‘ISColoringValue’ does not
name a type; did you mean ‘ISColoringType’?
221 | PETSC_EXTERN PetscErrorCode
ISColoringCreate(MPI_Comm,PetscInt,PetscInt,const
ISColoringValue[],PetscCopyMode,ISColoring*);
|
^~~~~~~~~~~~~~~
|
ISColoringType
/home/hpc/petsc/include/petscis.h:230:86: error: ‘ISColoringValue’ does not
name a type; did you mean ‘ISColoringView’?
230 | PETSC_EXTERN PetscErrorCode
ISColoringGetColors(ISColoring,PetscInt*,PetscInt*,const ISColoringValue**);
|
^~~~~~~~~~~~~~~
|
ISColoringView
In file included from /home/hpc/petsc/include/petscdm.h:6,
from /home/hpc/petsc/include/petscdmda.h:4,
from /home/hpc/petsc/include/petsc.h:14,
from
/home/hpc/dealII/dealii-9.2.0/include/deal.II/fe/fe_values.h:52,
from
/home/hpc/dealII/dealii-9.2.0/source/numerics/data_out.cc:23:
/home/hpc/petsc/include/petscmat.h:1335:68: error: ‘ISColoringValue’ has not
been declared
1335 | PETSC_EXTERN PetscErrorCode
MatColoringPatch(Mat,PetscInt,PetscInt,ISColoringValue[],ISColoring*);
|
^~~~~~~~~~~~~~~
[ 19%] Building CXX object
source/sundials/CMakeFiles/obj_sundials_debug.dir/copy.cc.o
[ 19%] Building CXX object
source/sundials/CMakeFiles/obj_sundials_debug.dir/kinsol.cc.o
make[2]: *** [source/numerics/CMakeFiles/obj_numerics_debug.dir/build.make:63:
source/numerics/CMakeFiles/obj_numerics_debug.dir/data_out.cc.o] Erro 1
make[1]: *** [CMakeFiles/Makefile2:1882:
source/numerics/CMakeFiles/obj_numerics_debug.dir/all] Erro 2
make[1]: ** Esperando que outros processos terminem.
[ 19%] Built target obj_sundials_debug
make: *** [Makefile:130: all] Erro 2
hpc@hpc:~/dealII/dealii-9.2.0/build$
how can I resolve this error?
Best regards,
--
The deal.II project is located at http://www.dealii.org/
<https://nam10.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.dealii.org%2F&data=04%7C01%7CWolfgang.Bangerth%40colostate.edu%7Cd587d0874fda4e3cec2b08d8f0ae5b89%7Cafb58802ff7a4bb1ab21367ff2ecfc8b%7C0%7C0%7C637523978960103853%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=XZzrxwNrIoXGRA7u%2BjqdoaEasOa0919yfdimTThIKz4%3D&reserved=0>
For mailing list/forum options, see
https://groups.google.com/d/forum/dealii?hl=en
<https://nam10.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgroups.google.com%2Fd%2Fforum%2Fdealii%3Fhl%3Den&data=04%7C01%7CWolfgang.Bangerth%40colostate.edu%7Cd587d0874fda4e3cec2b08d8f0ae5b89%7Cafb58802ff7a4bb1ab21367ff2ecfc8b%7C0%7C0%7C637523978960113849%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=HEDF6YFE0z5TvYRnp7jZ7mD31riWnHONO9pPFJT7qY8%3D&reserved=0>
---
You received this message because you are subscribed to the Google Groups
"deal.II User Group" group.
To unsubscribe from this group and stop receiving emails from it, send an
email to [email protected]
<mailto:[email protected]>.
To view this discussion on the web visit
https://groups.google.com/d/msgid/dealii/a6553a48-5bf5-4d0c-9556-b652bdc3d52bn%40googlegroups.com
<https://nam10.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgroups.google.com%2Fd%2Fmsgid%2Fdealii%2Fa6553a48-5bf5-4d0c-9556-b652bdc3d52bn%2540googlegroups.com%3Futm_medium%3Demail%26utm_source%3Dfooter&data=04%7C01%7CWolfgang.Bangerth%40colostate.edu%7Cd587d0874fda4e3cec2b08d8f0ae5b89%7Cafb58802ff7a4bb1ab21367ff2ecfc8b%7C0%7C0%7C637523978960113849%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=UqZrZuzCRb%2BmjI%2Bi1A1AOG5IE1VSdwI9vAxS%2Fy2EKwQ%3D&reserved=0>.
--
------------------------------------------------------------------------
Wolfgang Bangerth email: [email protected]
www: http://www.math.colostate.edu/~bangerth/
--
The deal.II project is located at http://www.dealii.org/
For mailing list/forum options, see
https://groups.google.com/d/forum/dealii?hl=en
---
You received this message because you are subscribed to the Google Groups "deal.II User Group" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to [email protected].
To view this discussion on the web visit
https://groups.google.com/d/msgid/dealii/12acd017-6157-ce64-f038-97c06ee52bbc%40colostate.edu.
