Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
ababa048 by Andreas Tille at 2020-04-10T01:45:07+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 09 Apr 2020 13:42:04 +0000
+Last-Update: Fri, 10 Apr 2020 01:42:04 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 09 Apr 2020 13:42:04 +0000
+Last-Update: Fri, 10 Apr 2020 01:42:04 +0000
source | version |
upstream_version | uploaders
| Last uploader | Last uploaded
-------------------------------+---------------------------------+---------------------------------+-------------------------------------------------------------------------+----------------------+------------------------
@@ -56,11 +56,11 @@ Last-Update: Thu, 09 Apr 2020 13:42:04 +0000
simka | 1.5.1 | 1.5.2
| Shayan Doust
| Andreas Tille | 2020-01-12 18:49:47+00
simpleitk | 1.0.1 | 1.2.0
| Ghislain Antony Vaillant
| Andreas Tille | 2019-01-30 10:06:08+00
skesa | 2.3.0 | 2.4.0
| Andreas Tille
| Andreas Tille | 2019-08-20 14:49:33+00
+ snakemake | 5.10.0 | 5.14.0
| Kevin Murray
| Andreas Tille | 2020-04-09 09:34:37+00
spades | 3.13.1 | 3.14.0
| Alexandre Mestiashvili,Andreas Tille,Michael R.
Crusoe,Sascha Steinbiss | Andreas Tille | 2019-11-22 10:05:04+00
spoa | 3.0.1 | 3.0.2
| Andreas Tille
| Andreas Tille | 2019-09-16 11:53:05+00
sra-sdk | 2.9.3 | 2.10.5
| Andreas Tille,Charles Plessy
| Steffen Moeller | 2018-10-23 20:40:02+00
stacks | 2.52 | 2.53
| Andreas Tille,Tim Booth
| Steffen Moeller | 2020-03-26 02:50:13+00
- sumatra | 1.0.31 | 1.0.34
| Andreas Tille,Tim Booth
| Andreas Tille | 2018-10-16 10:06:33+00
t-coffee | 12.00.7fb08c2 |
13.41.0.28bdc39 | Andreas Tille,Steffen Moeller
| Andreas Tille | 2019-02-15 07:57:10+00
unanimity | 3.3.0 | 4.2.0-1
| Afif Elghraoui,Andreas Tille
| Adrian Bunk | 2019-02-06 07:34:42+00
xmedcon | 0.16.1 | 0.16.2
| Andreas Tille,Roland Marcus Rutschmann
| Andreas Tille | 2019-01-25 18:23:59+00
@@ -174,6 +174,7 @@ Last-Update: Thu, 09 Apr 2020 13:42:04 +0000
nanopolish | 956136 | serious | nanopolish: FTBFS
(undefined references)
ncbi-blast+ | 891197 | normal | Please switch to pcre2
ncbi-tools6 | 225651 | wishlist | ncbi-tools-x11: want
Cn3D++
+ ncbi-vdb | 952623 | serious | sra-sdk: FTBFS: ld:
/usr/lib/x86_64-linux-gnu/libncbi-vdb.so: undefined reference to
`vdb_mbedtls_entropy_init'
ncbi-vdb | 952627 | serious | libncbi-vdb2 uses
undefined symbols
ncbi-vdb | 953897 | serious | libncbi-vdb2 uses
undefined symbols
nibabel | 868229 | normal | NotImplementedError:
Pixel Data is compressed in a format pydicom does not yet handle. Cannot return
array
@@ -240,7 +241,6 @@ Last-Update: Thu, 09 Apr 2020 13:42:04 +0000
simka | 954273 | important | simka: arm64 autopkgtest
time out
simpleitk | 949355 | serious | simpleitk FTBFS: test
failures
snakemake | 943956 | wishlist | snakemake: please make
the build reproducible
- snakemake | 955056 | important | snakemake: FTBFS with
Sphinx 2.4: AttributeError: 'member_descriptor' object has no attribute
'expandtabs'
snap | 927011 | minor | snap: Package info
contains a 404 url
snap-aligner | 848589 | normal | snap-aligner: Build
requires 188 GB of memory (fortunately not used, just allocated)
sofa-framework | 588278 | minor | sofa-tutorials: Sofa
tutorials config file tutorial.pro uses SOFA_DIR=../.. that is incorrect
@@ -251,8 +251,6 @@ Last-Update: Thu, 09 Apr 2020 13:42:04 +0000
spdlog | 953855 | normal | libspdlog-dev: tries to
include file that doesn't exist
sprai | 943280 | normal | sprai: Python2 removal
in sid/bullseye
sra-sdk | 943231 | normal | sra-sdk: Python2 removal
in sid/bullseye
- sra-sdk | 952623 | serious | sra-sdk: FTBFS: ld:
/usr/lib/x86_64-linux-gnu/libncbi-vdb.so: undefined reference to
`vdb_mbedtls_entropy_init'
- sumaclust | 956232 | normal | sumaclust: Last sequence
of input is skipped on arm64
tree-puzzle | 806214 | normal | tree-puzzle: Package
fails test suite
tree-puzzle | 890790 | minor | tree-puzzle: Please
provide autopkgtest
tree-puzzle | 951984 | serious | tree-puzzle: FTBFS:
mpi.h:322:57: error: static assertion failed: "MPI_Address was removed in
MPI-3.0. Use MPI_Get_address instead."
@@ -260,8 +258,9 @@ Last-Update: Thu, 09 Apr 2020 13:42:04 +0000
uc-echo | 953898 | serious | uc-echo: arm64
autopkgtest failure: NeighborJoinParam [...] failed to execute.
unanimity | 938751 | serious | unanimity: Python2
removal in sid/bullseye
unanimity | 939506 | serious | unanimity ftbfs in
unstable
+ wise | 956279 | normal | wise FTCBFS: uses the
build architecture compiler
xmedcon | 671828 | normal | xmedcon: Cannot open
file with YBR photometric interpretation
xmedcon | 779707 | normal | Errors when reading
dicomdir file: "No images found" / "Loading: DICM Error reading file"
xmedcon | 924017 | normal | desktop entry
-(194 rows)
+(193 rows)
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ababa048ae580ed0e6760d09e6f25c4dad534909
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ababa048ae580ed0e6760d09e6f25c4dad534909
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