Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
9951f785 by Andreas Tille at 2020-04-15T01:44:35+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 14 Apr 2020 13:42:04 +0000
+Last-Update: Wed, 15 Apr 2020 01:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 14 Apr 2020 13:42:04 +0000
+Last-Update: Wed, 15 Apr 2020 01:42:03 +0000
source | version |
upstream_version | uploaders
| Last uploader | Last uploaded
-------------------------------+---------------------------------+---------------------------------+---------------------------------------------------------------------------+----------------------+------------------------
@@ -19,7 +19,6 @@ Last-Update: Tue, 14 Apr 2020 13:42:04 +0000
htseq | 0.11.3 | 0.11.4
| Andreas Tille,Diane Trout
| Diane Trout | 2020-03-04 07:04:25+00
hyphy | 2.5.1 | 2.5.8
| Andreas Tille
| Andreas Tille | 2020-01-07 21:19:50+00
igdiscover | 0.11 | 0.12.3
| Steffen Moeller
| Andreas Tille | 2019-09-06 07:04:02+00
- igor | 1.3.0 | 1.4.0
| Steffen Moeller
| Andreas Tille | 2019-01-26 17:51:04+00
igv | 2.4.17 | 2.8.2
| Andreas Tille,Olivier Sallou
| Andreas Tille | 2019-01-30 15:11:57+00
imagej | 1.52r | 1.52v
| David Miguel Susano Pinto
| Andreas Tille | 2019-12-04 14:55:11+00
jebl2 | 0.1+git20180418.653eb83 |
0.1+git20190308.a98448e | Andreas Tille
| Andreas Tille | 2018-07-05 12:05:57+00
@@ -59,7 +58,6 @@ Last-Update: Tue, 14 Apr 2020 13:42:04 +0000
resfinder-db | 0.0+git20191001.149209d |
0.0+git20200408.0322c0d | Andreas Tille
| Andreas Tille | 2019-11-16 23:00:12+00
salmon | 0.12.0 | 1.2.0
| Kevin Murray,Michael R. Crusoe
| Andreas Tille | 2018-12-13 19:05:56+00
seaview | 4.7 | 5.0.2
| Andreas Tille,Charles Plessy
| Andreas Tille | 2018-05-09 13:43:40+00
- simde | 0.0.0.git.20200412 |
0.0.0.git.20200413 | Michael R. Crusoe
| Michael R. Crusoe | 2020-04-13 09:04:31+00
simpleitk | 1.0.1 | 1.2.0
| Ghislain Antony Vaillant
| Andreas Tille | 2019-01-30 10:06:08+00
snakemake | 5.10.0 | 5.14.0
| Kevin Murray
| Andreas Tille | 2020-04-09 09:34:37+00
stacks | 2.52 | 2.53
| Andreas Tille,Tim Booth
| Steffen Moeller | 2020-03-26 02:50:13+00
@@ -68,7 +66,7 @@ Last-Update: Tue, 14 Apr 2020 13:42:04 +0000
unanimity | 3.3.0 | 4.2.0-1
| Afif Elghraoui,Andreas Tille
| Adrian Bunk | 2019-02-06 07:34:42+00
vsearch | 2.14.1 | 2.14.2
| Andreas Tille,Tim Booth
| Andreas Tille | 2019-12-17 10:07:09+00
xmedcon | 0.16.1 | 0.16.2
| Andreas Tille,Roland Marcus Rutschmann
| Andreas Tille | 2019-01-25 18:23:59+00
-(66 rows)
+(64 rows)
source | id | severity |
title
@@ -93,6 +91,8 @@ Last-Update: Tue, 14 Apr 2020 13:42:04 +0000
bwa | 942447 | normal | Build bwa on ppc64el
camp | 900181 | normal | camp: FTBFS on 32bit big
endian: check metaclass->function("f4").call(object, camp::Args(1, 4,
15)).to<unsigned long>() == 20 has failed
clonalorigin | 884475 | wishlist | clonalorigin: FTBFS on
alpha: tests time out
+ clustalo | 956324 | serious | "clustalo: Bus error on
mipsel"
+ cyvcf2 | 956675 | serious | cyvcf2: test failures on
mipsel, ppc64el and s390x
dawg | 903886 | important | dawg: Test suite fails
dcmtk | 637687 | wishlist | libdcmtk2-dev: Dcmtk
headers cause compile failure
dcmtk | 675448 | important | dcmtk: dcmdjpeg does not
set (0028, 2114) LossyImageCompressionMethod when decompressing lossy
compressed DICOM file
@@ -209,9 +209,7 @@ Last-Update: Tue, 14 Apr 2020 13:42:04 +0000
psychopy | 953053 | important | psychopy: missing
python3 dependencies
pynast | 937488 | serious | pynast: Python2 removal
in sid/bullseye
pynast | 948081 | serious | pynast build depends on
and recommends the removed blast2 transitional package
- python-biom-format | 820060 | normal | python-biom-format:
broken on big-endian architectures
python-biom-format | 950929 | normal | python-biom-format:
FTBFS with pandas 1.0: test failures
- python-biopython | 956324 | serious | python-biopython: FTBFS
on mipsel
python-cobra | 955656 | serious | python-cobra: FTBFS: E
ModuleNotFoundError: No module named 'matplotlib'
python-cogent | 950474 | important | python-cogent FTBFS on
armel and i386: test failures
python-intervaltree-bio | 920545 | serious | python-intervaltree
breaks python-intervaltree-bio autopkgtest
@@ -238,8 +236,6 @@ Last-Update: Tue, 14 Apr 2020 13:42:04 +0000
sambamba | 948919 | serious | sambamba FTBFS:
undefined reference to 'cram_to_bam'
seqan2 | 892222 | normal | seqan2: FTBFS on hppa:
app_test_seqan_tcoffee fails on 2trx.mlcs.fasta
seqan2 | 917851 | important | seqan2 2.4.0+dfsg-9:
FTBFS, alignment problem
- seqsero | 955648 | serious | seqsero: FTBFS:
build-dependency not installable: sra-toolkit
- sibelia | 956575 | serious | sibelia: binary-all FTBFS
sight | 954711 | wishlist | FTBFS with Boost 1.71
simka | 954273 | important | simka: arm64 autopkgtest
time out
simpleitk | 949355 | serious | simpleitk FTBFS: test
failures
@@ -265,5 +261,5 @@ Last-Update: Tue, 14 Apr 2020 13:42:04 +0000
xmedcon | 671828 | normal | xmedcon: Cannot open
file with YBR photometric interpretation
xmedcon | 779707 | normal | Errors when reading
dicomdir file: "No images found" / "Loading: DICM Error reading file"
xmedcon | 924017 | normal | desktop entry
-(192 rows)
+(190 rows)
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9951f7857234b59c1cd9e29a2298ca03dcac8e35
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9951f7857234b59c1cd9e29a2298ca03dcac8e35
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