Hi,
after now having all preconditions for beast packaged in Debian upstream
had release a new version meanwhile. I was quite optimistic but now I
was running into Java detail problems:
compile-all:
[mkdir] Created dir:
/home/tillea/debian-maintain/repack/beast/beast-mcmc-1.7.2/build
[javac]
/home/tillea/debian-maintain/repack/beast/beast-mcmc-1.7.2/build.xml:67:
warning: 'includeantruntime' was not set, defaulting to
build.sysclasspath=last; set to false for repeatable builds
[javac] Compiling 1875 source files to
/home/tillea/debian-maintain/repack/beast/beast-mcmc-1.7.2/build
[javac]
/home/tillea/debian-maintain/repack/beast/beast-mcmc-1.7.2/src/dr/app/beagle/evomodel/sitemodel/EpochBranchSubstitutionModel.java:463:
cannot find symbol
[javac] symbol : method convolveTransitionMatrices(int[],int[],int[],int)
[javac] location: interface beagle.Beagle
[javac]
beagle.convolveTransitionMatrices(firstConvolutionBuffers, // A
[javac] ^
[javac] Note: Some input files use or override a deprecated API.
[javac] Note: Recompile with -Xlint:deprecation for details.
[javac] Note: Some input files use unchecked or unsafe operations.
[javac] Note: Recompile with -Xlint:unchecked for details.
[javac] 1 error
Any idea? (You can get the upstream source tarball via
uscan --verbose --force-depends
)
Kind regards
Andreas.
--
http://fam-tille.de
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