Hello, On السبت 22 آب 2015 12:34, Michael Crusoe wrote: > On Sat, Aug 22, 2015 at 6:49 AM Andreas Tille <[email protected] > <mailto:[email protected]>> wrote: > > Hi, > > On Sat, Aug 22, 2015 at 12:57:20AM +0000, Michael Crusoe wrote: > > > > trinityrnaseq: waiting on libjung-free-java, rsem, express, and > jaligner. > > Otherwise all the tests run successfully for me. > > I really hope that jaligner will make it soon - no idea why several > packages later in the queue made it way faster. > > > On the upside it is now the second oldest package in queue so hopefully > it will get some attention soon.
I've added it as a blocker to the trinityrnaseq ITP to express the dependency. jaligner also turns out to be a dependency of wgs-assembler, so I've expressed that as well. > > > Any and all assistance you and the group can provide for the above > would be > > greatly appreciated! > > Please be more verbose if you see tasks I could do to support this. > > > Do have experience in what incantations it takes to add the hardening > build flags to recalcitrant packages? Sometimes, upstream build systems don't support CPPFLAGS, so I find that putting the CPPFLAGS in with the CFLAGS/CXXFLAGS helps to get the hardening flags passed to the build system. something like this in d/rules: CFLAGS := $(CPPFLAGS) $(CFLAGS) I haven't checked your package, so I don't know if this is your problem exactly. regards Afif -- Afif Elghraoui | عفيف الغراوي http://afif.ghraoui.name
