Hi Sebastien,
We had used reads from Illumina platform for Ray-meta assembly. Each read
length was 251 bp. After adapter trimming, we used the trimmed
reads as query. Now my question is What is the minimum read length should
be considered for Ray-meta assembly ( We have read lengths ranges
from 1 to 250 bp after trimming).
And one more query, we used contig length >150 bp for further gene
prediction and blastx annotation. Is this right length for annotation?
Looking forward to hear from you
Regards
Raja
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