Regarding your patch, do you always expect a valley ? On 1 mars 2014 06:26, David Eccles (gringer) [bioinformat...@gringene.org] wrote: > À : Sébastien Boisvert > Cc : denovoassembler-users@lists.sourceforge.net > Objet : Re: [Denovoassembler-users] Coverage Distribution Analysis guesses > coverage peak of 2 instead of 500 > > On 01.03.2014 18:48, David Eccles (gringer) wrote: >> I'll try again with a larger kmer size. I guess that might cause a few more >> of those reads to become unique. > > Still no luck with k=31. > > Patch to only start counting from first valley is attached. I have not yet > tested it, so expect bugs. > > - David
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