Hi Nason
"SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock obtain
timed out: NativeFSLock@./solr/data/index/write.lock "
I would suspect file permissions as the fault.
To put the app in "/usr/local/dspace" is unusual.
Try the following at your own risk:
chmod 0777 -R /usr/local/dspace/solr
My preference for app location is "/home/dspace" which is on
a separate volume/partition.
See:
http://wiki.lib.sun.ac.za/index.php/SUNScholar/Install_Ubuntu/S03/Disk_Partitioning
Regards
hg
On 8 May 2013 12:00, Nason Bimbe <[email protected]> wrote:
> We have upgraded from 1.8.2 to 3.1 and since then new items added can not
> be found via search neither are they visible in the latest submission lists
> but the items can be accessed directly if one knows the uri.
>
> When I ran update-discovery-index -f I get the following
>
> ris:/usr/local/dspace# bin/dspace update-discovery-index -f
> INFO [main] (DSpaceKernelInit.java:52) - Created new kernel:
> DSpaceKernel:org.dspace:name=dc341a12-aca7-4e50-a578-4d20d2a909e7,type=DSpaceKernel:lastLoad=null:loadTime=0:running=false:kernel=null
> INFO [main] (ConfigurationManager.java:1224) - Loading from classloader:
> file:/usr/local/dspace/config/dspace.cfg
> INFO [main] (ConfigurationManager.java:1224) - Using dspace provided log
> configuration (log.init.config)
> INFO [main] (ConfigurationManager.java:1224) - Loading:
> /usr/local/dspace/config/log4j.properties
> Exception: Internal Server Error
>
> Internal Server Error
>
> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
> org.dspace.discovery.SearchServiceException: Internal Server Error
>
> Internal Server Error
>
> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
> at
> org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:418)
> at org.dspace.discovery.IndexClient.main(IndexClient.java:119)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> at java.lang.reflect.Method.invoke(Method.java:597)
> at
> org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:183)
> Caused by: org.apache.solr.common.SolrException: Internal Server Error
>
> Internal Server Error
>
> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
> at
> org.apache.solr.client.solrj.impl.CommonsHttpSolrServer.request(CommonsHttpSolrServer.java:435)
> at
> org.apache.solr.client.solrj.impl.CommonsHttpSolrServer.request(CommonsHttpSolrServer.java:244)
> at
> org.apache.solr.client.solrj.request.AbstractUpdateRequest.process(AbstractUpdateRequest.java:105)
> at
> org.apache.solr.client.solrj.SolrServer.deleteByQuery(SolrServer.java:110)
> at
> org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:384)
>
>
> and in the catalina.out I get this
>
> 07-May-2013 14:51:24 org.apache.solr.core.SolrCore execute
> INFO: [search] webapp=/solr path=/update params={wt=javabin&version=2}
> status=500 QTime=11291
> 07-May-2013 14:51:24 org.apache.solr.common.SolrException log
> SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock obtain
> timed out: NativeFSLock@./solr/data/index/write.lock
> at org.apache.lucene.store.Lock.obtain(Lock.java:84)
> at
> org.apache.lucene.index.IndexWriter.<init>(IndexWriter.java:1108)
> at
> org.apache.solr.update.SolrIndexWriter.<init>(SolrIndexWriter.java:83)
> at
> org.apache.solr.update.UpdateHandler.createMainIndexWriter(UpdateHandler.java:101)
> at
> org.apache.solr.update.DirectUpdateHandler2.openWriter(DirectUpdateHandler2.java:171)
> at
> org.apache.solr.update.DirectUpdateHandler2.deleteByQuery(DirectUpdateHandler2.java:324)
> at
> org.apache.solr.update.processor.RunUpdateProcessor.processDelete(RunUpdateProcessorFactory.java:71)
> at
> org.apache.solr.update.processor.LogUpdateProcessor.processDelete(LogUpdateProcessorFactory.java:137)
> at
> org.apache.solr.handler.XMLLoader.processDelete(XMLLoader.java:256)
> at
> org.apache.solr.handler.XMLLoader.processUpdate(XMLLoader.java:202)
> at org.apache.solr.handler.XMLLoader.load(XMLLoader.java:79)
> at
> org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:58)
> at
> org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:129)
> at org.apache.solr.core.SolrCore.execute(SolrCore.java:1372)
> at
> org.apache.solr.servlet.SolrDispatchFilter.execute(SolrDispatchFilter.java:356)
> at
> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:252)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at
> org.dspace.solr.filters.LocalHostRestrictionFilter.doFilter(LocalHostRestrictionFilter.java:60)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
> at
> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298)
> at
> org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:852)
> at
> org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:588)
> at
> org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
> at java.lang.Thread.run(Thread.java:662)
>
> I have read through similar problems and possible solutions and not
> successful. The other thing I have also noticed is that all the solr cores
> data folders are empty ( [dspace]/solr/search/data,
> [dspace]/solr/search/data, etc). [dspace]/search contains some files and
> this is updated whenever I ran dspace index command.
>
>
> Regards
> Nason
>
>
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"Graph Databases" is the definitive new guide to graph databases and
their applications. This 200-page book is written by three acclaimed
leaders in the field. The early access version is available now.
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