Hi Nason
Then I am out of ideas without access to your server.
Perhaps others on the list can help.
Regards
hg
On 8 May 2013 12:22, Nason Bimbe <[email protected]> wrote:
> Thanks Hilton,
> I have done what you suggested and I am still getting the same error.
>
> Thanks
> Nason
>
>
> On 8 May 2013 11:10, Hilton Gibson <[email protected]> wrote:
>
>> Hi Nason
>>
>> "SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock obtain
>> timed out: NativeFSLock@./solr/data/index/write.lock "
>>
>> I would suspect file permissions as the fault.
>> To put the app in "/usr/local/dspace" is unusual.
>> Try the following at your own risk:
>>
>> chmod 0777 -R /usr/local/dspace/solr
>>
>> My preference for app location is "/home/dspace" which is on
>> a separate volume/partition.
>> See:
>> http://wiki.lib.sun.ac.za/index.php/SUNScholar/Install_Ubuntu/S03/Disk_Partitioning
>>
>> Regards
>>
>> hg
>>
>>
>> On 8 May 2013 12:00, Nason Bimbe <[email protected]> wrote:
>>
>>> We have upgraded from 1.8.2 to 3.1 and since then new items added can
>>> not be found via search neither are they visible in the latest submission
>>> lists but the items can be accessed directly if one knows the uri.
>>>
>>> When I ran update-discovery-index -f I get the following
>>>
>>> ris:/usr/local/dspace# bin/dspace update-discovery-index -f
>>> INFO [main] (DSpaceKernelInit.java:52) - Created new kernel:
>>> DSpaceKernel:org.dspace:name=dc341a12-aca7-4e50-a578-4d20d2a909e7,type=DSpaceKernel:lastLoad=null:loadTime=0:running=false:kernel=null
>>> INFO [main] (ConfigurationManager.java:1224) - Loading from
>>> classloader: file:/usr/local/dspace/config/dspace.cfg
>>> INFO [main] (ConfigurationManager.java:1224) - Using dspace provided
>>> log configuration (log.init.config)
>>> INFO [main] (ConfigurationManager.java:1224) - Loading:
>>> /usr/local/dspace/config/log4j.properties
>>> Exception: Internal Server Error
>>>
>>> Internal Server Error
>>>
>>> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
>>> org.dspace.discovery.SearchServiceException: Internal Server Error
>>>
>>> Internal Server Error
>>>
>>> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
>>> at
>>> org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:418)
>>> at org.dspace.discovery.IndexClient.main(IndexClient.java:119)
>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>> at
>>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>>> at
>>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>>> at java.lang.reflect.Method.invoke(Method.java:597)
>>> at
>>> org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:183)
>>> Caused by: org.apache.solr.common.SolrException: Internal Server Error
>>>
>>> Internal Server Error
>>>
>>> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
>>> at
>>> org.apache.solr.client.solrj.impl.CommonsHttpSolrServer.request(CommonsHttpSolrServer.java:435)
>>> at
>>> org.apache.solr.client.solrj.impl.CommonsHttpSolrServer.request(CommonsHttpSolrServer.java:244)
>>> at
>>> org.apache.solr.client.solrj.request.AbstractUpdateRequest.process(AbstractUpdateRequest.java:105)
>>> at
>>> org.apache.solr.client.solrj.SolrServer.deleteByQuery(SolrServer.java:110)
>>> at
>>> org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:384)
>>>
>>>
>>> and in the catalina.out I get this
>>>
>>> 07-May-2013 14:51:24 org.apache.solr.core.SolrCore execute
>>> INFO: [search] webapp=/solr path=/update params={wt=javabin&version=2}
>>> status=500 QTime=11291
>>> 07-May-2013 14:51:24 org.apache.solr.common.SolrException log
>>> SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock obtain
>>> timed out: NativeFSLock@./solr/data/index/write.lock
>>> at org.apache.lucene.store.Lock.obtain(Lock.java:84)
>>> at
>>> org.apache.lucene.index.IndexWriter.<init>(IndexWriter.java:1108)
>>> at
>>> org.apache.solr.update.SolrIndexWriter.<init>(SolrIndexWriter.java:83)
>>> at
>>> org.apache.solr.update.UpdateHandler.createMainIndexWriter(UpdateHandler.java:101)
>>> at
>>> org.apache.solr.update.DirectUpdateHandler2.openWriter(DirectUpdateHandler2.java:171)
>>> at
>>> org.apache.solr.update.DirectUpdateHandler2.deleteByQuery(DirectUpdateHandler2.java:324)
>>> at
>>> org.apache.solr.update.processor.RunUpdateProcessor.processDelete(RunUpdateProcessorFactory.java:71)
>>> at
>>> org.apache.solr.update.processor.LogUpdateProcessor.processDelete(LogUpdateProcessorFactory.java:137)
>>> at
>>> org.apache.solr.handler.XMLLoader.processDelete(XMLLoader.java:256)
>>> at
>>> org.apache.solr.handler.XMLLoader.processUpdate(XMLLoader.java:202)
>>> at org.apache.solr.handler.XMLLoader.load(XMLLoader.java:79)
>>> at
>>> org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:58)
>>> at
>>> org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:129)
>>> at org.apache.solr.core.SolrCore.execute(SolrCore.java:1372)
>>> at
>>> org.apache.solr.servlet.SolrDispatchFilter.execute(SolrDispatchFilter.java:356)
>>> at
>>> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:252)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
>>> at
>>> org.dspace.solr.filters.LocalHostRestrictionFilter.doFilter(LocalHostRestrictionFilter.java:60)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
>>> at
>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
>>> at
>>> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
>>> at
>>> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
>>> at
>>> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
>>> at
>>> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
>>> at
>>> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
>>> at
>>> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298)
>>> at
>>> org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:852)
>>> at
>>> org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:588)
>>> at
>>> org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
>>> at java.lang.Thread.run(Thread.java:662)
>>>
>>> I have read through similar problems and possible solutions and not
>>> successful. The other thing I have also noticed is that all the solr cores
>>> data folders are empty ( [dspace]/solr/search/data,
>>> [dspace]/solr/search/data, etc). [dspace]/search contains some files and
>>> this is updated whenever I ran dspace index command.
>>>
>>>
>>> Regards
>>> Nason
>>>
>>>
>>> ------------------------------------------------------------------------------
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>>> List Etiquette:
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>>>
>>
>>
>>
>> --
>> *Hilton Gibson*
>> Systems Administrator
>> JS Gericke Library
>> Room 1025C
>> Stellenbosch University
>> Private Bag X5036
>> Stellenbosch
>> 7599
>> South Africa
>>
>> Tel: +27 21 808 4100 | Cell: +27 84 646 4758
>> http://library.sun.ac.za
>> http://scholar.sun.ac.za
>> http://ar1.sun.ac.za
>> http://aj1.sun.ac.za
>>
>
>
--
*Hilton Gibson*
Systems Administrator
JS Gericke Library
Room 1025C
Stellenbosch University
Private Bag X5036
Stellenbosch
7599
South Africa
Tel: +27 21 808 4100 | Cell: +27 84 646 4758
http://library.sun.ac.za
http://scholar.sun.ac.za
http://ar1.sun.ac.za
http://aj1.sun.ac.za
------------------------------------------------------------------------------
Learn Graph Databases - Download FREE O'Reilly Book
"Graph Databases" is the definitive new guide to graph databases and
their applications. This 200-page book is written by three acclaimed
leaders in the field. The early access version is available now.
Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
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