Hi Nason,
do you see any of these write.lock files on your system? You should be able
to safely delete them.
Does that help in any way?
SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock obtain
timed out: NativeFSLock@./solr/data/index/write.lock
best regards,
Bram
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On Wed, May 8, 2013 at 12:28 PM, Hilton Gibson <[email protected]>wrote:
> Hi Nason
>
> Then I am out of ideas without access to your server.
> Perhaps others on the list can help.
>
> Regards
>
> hg
>
>
> On 8 May 2013 12:22, Nason Bimbe <[email protected]> wrote:
>
>> Thanks Hilton,
>> I have done what you suggested and I am still getting the same error.
>>
>> Thanks
>> Nason
>>
>>
>> On 8 May 2013 11:10, Hilton Gibson <[email protected]> wrote:
>>
>>> Hi Nason
>>>
>>> "SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock obtain
>>> timed out: NativeFSLock@./solr/data/index/write.lock "
>>>
>>> I would suspect file permissions as the fault.
>>> To put the app in "/usr/local/dspace" is unusual.
>>> Try the following at your own risk:
>>>
>>> chmod 0777 -R /usr/local/dspace/solr
>>>
>>> My preference for app location is "/home/dspace" which is on
>>> a separate volume/partition.
>>> See:
>>> http://wiki.lib.sun.ac.za/index.php/SUNScholar/Install_Ubuntu/S03/Disk_Partitioning
>>>
>>> Regards
>>>
>>> hg
>>>
>>>
>>> On 8 May 2013 12:00, Nason Bimbe <[email protected]> wrote:
>>>
>>>> We have upgraded from 1.8.2 to 3.1 and since then new items added can
>>>> not be found via search neither are they visible in the latest submission
>>>> lists but the items can be accessed directly if one knows the uri.
>>>>
>>>> When I ran update-discovery-index -f I get the following
>>>>
>>>> ris:/usr/local/dspace# bin/dspace update-discovery-index -f
>>>> INFO [main] (DSpaceKernelInit.java:52) - Created new kernel:
>>>> DSpaceKernel:org.dspace:name=dc341a12-aca7-4e50-a578-4d20d2a909e7,type=DSpaceKernel:lastLoad=null:loadTime=0:running=false:kernel=null
>>>> INFO [main] (ConfigurationManager.java:1224) - Loading from
>>>> classloader: file:/usr/local/dspace/config/dspace.cfg
>>>> INFO [main] (ConfigurationManager.java:1224) - Using dspace provided
>>>> log configuration (log.init.config)
>>>> INFO [main] (ConfigurationManager.java:1224) - Loading:
>>>> /usr/local/dspace/config/log4j.properties
>>>> Exception: Internal Server Error
>>>>
>>>> Internal Server Error
>>>>
>>>> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
>>>> org.dspace.discovery.SearchServiceException: Internal Server Error
>>>>
>>>> Internal Server Error
>>>>
>>>> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
>>>> at
>>>> org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:418)
>>>> at org.dspace.discovery.IndexClient.main(IndexClient.java:119)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>>> at
>>>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>>>> at
>>>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>>>> at java.lang.reflect.Method.invoke(Method.java:597)
>>>> at
>>>> org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:183)
>>>> Caused by: org.apache.solr.common.SolrException: Internal Server Error
>>>>
>>>> Internal Server Error
>>>>
>>>> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
>>>> at
>>>> org.apache.solr.client.solrj.impl.CommonsHttpSolrServer.request(CommonsHttpSolrServer.java:435)
>>>> at
>>>> org.apache.solr.client.solrj.impl.CommonsHttpSolrServer.request(CommonsHttpSolrServer.java:244)
>>>> at
>>>> org.apache.solr.client.solrj.request.AbstractUpdateRequest.process(AbstractUpdateRequest.java:105)
>>>> at
>>>> org.apache.solr.client.solrj.SolrServer.deleteByQuery(SolrServer.java:110)
>>>> at
>>>> org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:384)
>>>>
>>>>
>>>> and in the catalina.out I get this
>>>>
>>>> 07-May-2013 14:51:24 org.apache.solr.core.SolrCore execute
>>>> INFO: [search] webapp=/solr path=/update params={wt=javabin&version=2}
>>>> status=500 QTime=11291
>>>> 07-May-2013 14:51:24 org.apache.solr.common.SolrException log
>>>> SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock obtain
>>>> timed out: NativeFSLock@./solr/data/index/write.lock
>>>> at org.apache.lucene.store.Lock.obtain(Lock.java:84)
>>>> at
>>>> org.apache.lucene.index.IndexWriter.<init>(IndexWriter.java:1108)
>>>> at
>>>> org.apache.solr.update.SolrIndexWriter.<init>(SolrIndexWriter.java:83)
>>>> at
>>>> org.apache.solr.update.UpdateHandler.createMainIndexWriter(UpdateHandler.java:101)
>>>> at
>>>> org.apache.solr.update.DirectUpdateHandler2.openWriter(DirectUpdateHandler2.java:171)
>>>> at
>>>> org.apache.solr.update.DirectUpdateHandler2.deleteByQuery(DirectUpdateHandler2.java:324)
>>>> at
>>>> org.apache.solr.update.processor.RunUpdateProcessor.processDelete(RunUpdateProcessorFactory.java:71)
>>>> at
>>>> org.apache.solr.update.processor.LogUpdateProcessor.processDelete(LogUpdateProcessorFactory.java:137)
>>>> at
>>>> org.apache.solr.handler.XMLLoader.processDelete(XMLLoader.java:256)
>>>> at
>>>> org.apache.solr.handler.XMLLoader.processUpdate(XMLLoader.java:202)
>>>> at org.apache.solr.handler.XMLLoader.load(XMLLoader.java:79)
>>>> at
>>>> org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:58)
>>>> at
>>>> org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:129)
>>>> at org.apache.solr.core.SolrCore.execute(SolrCore.java:1372)
>>>> at
>>>> org.apache.solr.servlet.SolrDispatchFilter.execute(SolrDispatchFilter.java:356)
>>>> at
>>>> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:252)
>>>> at
>>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
>>>> at
>>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
>>>> at
>>>> org.dspace.solr.filters.LocalHostRestrictionFilter.doFilter(LocalHostRestrictionFilter.java:60)
>>>> at
>>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
>>>> at
>>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
>>>> at
>>>> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
>>>> at
>>>> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
>>>> at
>>>> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
>>>> at
>>>> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
>>>> at
>>>> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
>>>> at
>>>> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298)
>>>> at
>>>> org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:852)
>>>> at
>>>> org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:588)
>>>> at
>>>> org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
>>>> at java.lang.Thread.run(Thread.java:662)
>>>>
>>>> I have read through similar problems and possible solutions and not
>>>> successful. The other thing I have also noticed is that all the solr cores
>>>> data folders are empty ( [dspace]/solr/search/data,
>>>> [dspace]/solr/search/data, etc). [dspace]/search contains some files and
>>>> this is updated whenever I ran dspace index command.
>>>>
>>>>
>>>> Regards
>>>> Nason
>>>>
>>>>
>>>> ------------------------------------------------------------------------------
>>>> Learn Graph Databases - Download FREE O'Reilly Book
>>>> "Graph Databases" is the definitive new guide to graph databases and
>>>> their applications. This 200-page book is written by three acclaimed
>>>> leaders in the field. The early access version is available now.
>>>> Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
>>>> _______________________________________________
>>>> DSpace-tech mailing list
>>>> [email protected]
>>>> https://lists.sourceforge.net/lists/listinfo/dspace-tech
>>>> List Etiquette:
>>>> https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
>>>>
>>>
>>>
>>>
>>> --
>>> *Hilton Gibson*
>>> Systems Administrator
>>> JS Gericke Library
>>> Room 1025C
>>> Stellenbosch University
>>> Private Bag X5036
>>> Stellenbosch
>>> 7599
>>> South Africa
>>>
>>> Tel: +27 21 808 4100 | Cell: +27 84 646 4758
>>> http://library.sun.ac.za
>>> http://scholar.sun.ac.za
>>> http://ar1.sun.ac.za
>>> http://aj1.sun.ac.za
>>>
>>
>>
>
>
> --
> *Hilton Gibson*
> Systems Administrator
> JS Gericke Library
> Room 1025C
> Stellenbosch University
> Private Bag X5036
> Stellenbosch
> 7599
> South Africa
>
> Tel: +27 21 808 4100 | Cell: +27 84 646 4758
> http://library.sun.ac.za
> http://scholar.sun.ac.za
> http://ar1.sun.ac.za
> http://aj1.sun.ac.za
>
>
> ------------------------------------------------------------------------------
> Learn Graph Databases - Download FREE O'Reilly Book
> "Graph Databases" is the definitive new guide to graph databases and
> their applications. This 200-page book is written by three acclaimed
> leaders in the field. The early access version is available now.
> Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
> _______________________________________________
> DSpace-tech mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/dspace-tech
> List Etiquette:
> https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
>
------------------------------------------------------------------------------
Learn Graph Databases - Download FREE O'Reilly Book
"Graph Databases" is the definitive new guide to graph databases and
their applications. This 200-page book is written by three acclaimed
leaders in the field. The early access version is available now.
Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
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