Hi Bram,
I have now found that the solr folder is actually in /home/dspace/solr/
rather than /usr/local/dspace/solr/. Why the difference because I intended
the solr folder to be in /usr/local/dspace/solr?
Thanks
Nason
On 8 May 2013 12:11, Bram Luyten <[email protected]> wrote:
> Hi Nason,
>
> do you see any of these write.lock files on your system? You should be
> able to safely delete them.
> Does that help in any way?
>
> SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock obtain
> timed out: NativeFSLock@./solr/data/index/write.lock
>
> best regards,
>
> Bram
>
> --
> [image: logo]
> *Bram Luyten* *@mire*
>
> *2888 Loker Avenue East, Suite 315, Carlsbad, CA. 92010*
> *Esperantolaan 4, Heverlee 3001, Belgium*
> www.atmire.com<http://atmire.com/website/?q=services&utm_source=emailfooter&utm_medium=email&utm_campaign=braml>
>
>
> On Wed, May 8, 2013 at 12:28 PM, Hilton Gibson <[email protected]>wrote:
>
>> Hi Nason
>>
>> Then I am out of ideas without access to your server.
>> Perhaps others on the list can help.
>>
>> Regards
>>
>> hg
>>
>>
>> On 8 May 2013 12:22, Nason Bimbe <[email protected]> wrote:
>>
>>> Thanks Hilton,
>>> I have done what you suggested and I am still getting the same error.
>>>
>>> Thanks
>>> Nason
>>>
>>>
>>> On 8 May 2013 11:10, Hilton Gibson <[email protected]> wrote:
>>>
>>>> Hi Nason
>>>>
>>>> "SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock
>>>> obtain timed out: NativeFSLock@./solr/data/index/write.lock "
>>>>
>>>> I would suspect file permissions as the fault.
>>>> To put the app in "/usr/local/dspace" is unusual.
>>>> Try the following at your own risk:
>>>>
>>>> chmod 0777 -R /usr/local/dspace/solr
>>>>
>>>> My preference for app location is "/home/dspace" which is on
>>>> a separate volume/partition.
>>>> See:
>>>> http://wiki.lib.sun.ac.za/index.php/SUNScholar/Install_Ubuntu/S03/Disk_Partitioning
>>>>
>>>> Regards
>>>>
>>>> hg
>>>>
>>>>
>>>> On 8 May 2013 12:00, Nason Bimbe <[email protected]> wrote:
>>>>
>>>>> We have upgraded from 1.8.2 to 3.1 and since then new items added can
>>>>> not be found via search neither are they visible in the latest submission
>>>>> lists but the items can be accessed directly if one knows the uri.
>>>>>
>>>>> When I ran update-discovery-index -f I get the following
>>>>>
>>>>> ris:/usr/local/dspace# bin/dspace update-discovery-index -f
>>>>> INFO [main] (DSpaceKernelInit.java:52) - Created new kernel:
>>>>> DSpaceKernel:org.dspace:name=dc341a12-aca7-4e50-a578-4d20d2a909e7,type=DSpaceKernel:lastLoad=null:loadTime=0:running=false:kernel=null
>>>>> INFO [main] (ConfigurationManager.java:1224) - Loading from
>>>>> classloader: file:/usr/local/dspace/config/dspace.cfg
>>>>> INFO [main] (ConfigurationManager.java:1224) - Using dspace provided
>>>>> log configuration (log.init.config)
>>>>> INFO [main] (ConfigurationManager.java:1224) - Loading:
>>>>> /usr/local/dspace/config/log4j.properties
>>>>> Exception: Internal Server Error
>>>>>
>>>>> Internal Server Error
>>>>>
>>>>> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
>>>>> org.dspace.discovery.SearchServiceException: Internal Server Error
>>>>>
>>>>> Internal Server Error
>>>>>
>>>>> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
>>>>> at
>>>>> org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:418)
>>>>> at org.dspace.discovery.IndexClient.main(IndexClient.java:119)
>>>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>>>> at
>>>>> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>>>>> at
>>>>> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>>>>> at java.lang.reflect.Method.invoke(Method.java:597)
>>>>> at
>>>>> org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:183)
>>>>> Caused by: org.apache.solr.common.SolrException: Internal Server Error
>>>>>
>>>>> Internal Server Error
>>>>>
>>>>> request: http://localhost:8080/solr/search/update?wt=javabin&version=2
>>>>> at
>>>>> org.apache.solr.client.solrj.impl.CommonsHttpSolrServer.request(CommonsHttpSolrServer.java:435)
>>>>> at
>>>>> org.apache.solr.client.solrj.impl.CommonsHttpSolrServer.request(CommonsHttpSolrServer.java:244)
>>>>> at
>>>>> org.apache.solr.client.solrj.request.AbstractUpdateRequest.process(AbstractUpdateRequest.java:105)
>>>>> at
>>>>> org.apache.solr.client.solrj.SolrServer.deleteByQuery(SolrServer.java:110)
>>>>> at
>>>>> org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:384)
>>>>>
>>>>>
>>>>> and in the catalina.out I get this
>>>>>
>>>>> 07-May-2013 14:51:24 org.apache.solr.core.SolrCore execute
>>>>> INFO: [search] webapp=/solr path=/update params={wt=javabin&version=2}
>>>>> status=500 QTime=11291
>>>>> 07-May-2013 14:51:24 org.apache.solr.common.SolrException log
>>>>> SEVERE: org.apache.lucene.store.LockObtainFailedException: Lock obtain
>>>>> timed out: NativeFSLock@./solr/data/index/write.lock
>>>>> at org.apache.lucene.store.Lock.obtain(Lock.java:84)
>>>>> at
>>>>> org.apache.lucene.index.IndexWriter.<init>(IndexWriter.java:1108)
>>>>> at
>>>>> org.apache.solr.update.SolrIndexWriter.<init>(SolrIndexWriter.java:83)
>>>>> at
>>>>> org.apache.solr.update.UpdateHandler.createMainIndexWriter(UpdateHandler.java:101)
>>>>> at
>>>>> org.apache.solr.update.DirectUpdateHandler2.openWriter(DirectUpdateHandler2.java:171)
>>>>> at
>>>>> org.apache.solr.update.DirectUpdateHandler2.deleteByQuery(DirectUpdateHandler2.java:324)
>>>>> at
>>>>> org.apache.solr.update.processor.RunUpdateProcessor.processDelete(RunUpdateProcessorFactory.java:71)
>>>>> at
>>>>> org.apache.solr.update.processor.LogUpdateProcessor.processDelete(LogUpdateProcessorFactory.java:137)
>>>>> at
>>>>> org.apache.solr.handler.XMLLoader.processDelete(XMLLoader.java:256)
>>>>> at
>>>>> org.apache.solr.handler.XMLLoader.processUpdate(XMLLoader.java:202)
>>>>> at org.apache.solr.handler.XMLLoader.load(XMLLoader.java:79)
>>>>> at
>>>>> org.apache.solr.handler.ContentStreamHandlerBase.handleRequestBody(ContentStreamHandlerBase.java:58)
>>>>> at
>>>>> org.apache.solr.handler.RequestHandlerBase.handleRequest(RequestHandlerBase.java:129)
>>>>> at org.apache.solr.core.SolrCore.execute(SolrCore.java:1372)
>>>>> at
>>>>> org.apache.solr.servlet.SolrDispatchFilter.execute(SolrDispatchFilter.java:356)
>>>>> at
>>>>> org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:252)
>>>>> at
>>>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
>>>>> at
>>>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
>>>>> at
>>>>> org.dspace.solr.filters.LocalHostRestrictionFilter.doFilter(LocalHostRestrictionFilter.java:60)
>>>>> at
>>>>> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
>>>>> at
>>>>> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
>>>>> at
>>>>> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
>>>>> at
>>>>> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
>>>>> at
>>>>> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
>>>>> at
>>>>> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
>>>>> at
>>>>> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
>>>>> at
>>>>> org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298)
>>>>> at
>>>>> org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:852)
>>>>> at
>>>>> org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:588)
>>>>> at
>>>>> org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
>>>>> at java.lang.Thread.run(Thread.java:662)
>>>>>
>>>>> I have read through similar problems and possible solutions and not
>>>>> successful. The other thing I have also noticed is that all the solr cores
>>>>> data folders are empty ( [dspace]/solr/search/data,
>>>>> [dspace]/solr/search/data, etc). [dspace]/search contains some files and
>>>>> this is updated whenever I ran dspace index command.
>>>>>
>>>>>
>>>>> Regards
>>>>> Nason
>>>>>
>>>>>
>>>>> ------------------------------------------------------------------------------
>>>>> Learn Graph Databases - Download FREE O'Reilly Book
>>>>> "Graph Databases" is the definitive new guide to graph databases and
>>>>> their applications. This 200-page book is written by three acclaimed
>>>>> leaders in the field. The early access version is available now.
>>>>> Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
>>>>> _______________________________________________
>>>>> DSpace-tech mailing list
>>>>> [email protected]
>>>>> https://lists.sourceforge.net/lists/listinfo/dspace-tech
>>>>> List Etiquette:
>>>>> https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
>>>>>
>>>>
>>>>
>>>>
>>>> --
>>>> *Hilton Gibson*
>>>> Systems Administrator
>>>> JS Gericke Library
>>>> Room 1025C
>>>> Stellenbosch University
>>>> Private Bag X5036
>>>> Stellenbosch
>>>> 7599
>>>> South Africa
>>>>
>>>> Tel: +27 21 808 4100 | Cell: +27 84 646 4758
>>>> http://library.sun.ac.za
>>>> http://scholar.sun.ac.za
>>>> http://ar1.sun.ac.za
>>>> http://aj1.sun.ac.za
>>>>
>>>
>>>
>>
>>
>> --
>> *Hilton Gibson*
>> Systems Administrator
>> JS Gericke Library
>> Room 1025C
>> Stellenbosch University
>> Private Bag X5036
>> Stellenbosch
>> 7599
>> South Africa
>>
>> Tel: +27 21 808 4100 | Cell: +27 84 646 4758
>> http://library.sun.ac.za
>> http://scholar.sun.ac.za
>> http://ar1.sun.ac.za
>> http://aj1.sun.ac.za
>>
>>
>> ------------------------------------------------------------------------------
>> Learn Graph Databases - Download FREE O'Reilly Book
>> "Graph Databases" is the definitive new guide to graph databases and
>> their applications. This 200-page book is written by three acclaimed
>> leaders in the field. The early access version is available now.
>> Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
>> _______________________________________________
>> DSpace-tech mailing list
>> [email protected]
>> https://lists.sourceforge.net/lists/listinfo/dspace-tech
>> List Etiquette:
>> https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
>>
>
>
------------------------------------------------------------------------------
Learn Graph Databases - Download FREE O'Reilly Book
"Graph Databases" is the definitive new guide to graph databases and
their applications. This 200-page book is written by three acclaimed
leaders in the field. The early access version is available now.
Download your free book today! http://p.sf.net/sfu/neotech_d2d_may
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