Hi Loris, Looks like something was wrong before as today I could build it with no problems, I had to first build GCC 8.3 and then build Bowtie2 v 2.3.5.1, for some reason directly building it did not work.
Sorry for the confusion, Borut On Wed, 2023-10-25 at 07:48 +0200, Loris Bennett wrote: > Hi Borut, > > Borut Rozman <[email protected]> writes: > > > Hi everyone, > > > > Has anyone managed to build Bowtie2 2.3.5.1 with gcc 11.3.0 ? Since > > I > > run on ubuntu 22.04 nothing below 11.2.0 version of gcc does not > > compile which is quite stressful as some users request ancient > > software :/ > > You have a double negative there which makes it slightly difficult to > understand your problem. Do you mean that you can't compile anything > which uses GCC 11.2.0 or earlier? If so, why not? > > Whether or not you use Ubuntu 22.04 should not make a difference. No > matter what version of GCC the operating system provides, you should > still be able to build toolchains with later versions. For example, > the > default version of GCC on our system is 4.8.5, but we have software > built with versions 7.3.0 to 12.2.0. > > Or have I misunderstood your problem? > > Cheers, > > Loris >
