Hi Borut, Borut Rozman <[email protected]> writes:
> Hi Loris, > > Looks like something was wrong before as today I could build it with no > problems, I had to first build GCC 8.3 and then build Bowtie2 v > 2.3.5.1, for some reason directly building it did not work. Did you perhaps forget the option '--robot'? This should cause all missing dependencies, such as the appropriate version of the compile, to be built automatically. Cheers, Loris > Sorry for the confusion, > Borut > > > On Wed, 2023-10-25 at 07:48 +0200, Loris Bennett wrote: >> Hi Borut, >> >> Borut Rozman <[email protected]> writes: >> >> > Hi everyone, >> > >> > Has anyone managed to build Bowtie2 2.3.5.1 with gcc 11.3.0 ? Since >> > I >> > run on ubuntu 22.04 nothing below 11.2.0 version of gcc does not >> > compile which is quite stressful as some users request ancient >> > software :/ >> >> You have a double negative there which makes it slightly difficult to >> understand your problem. Do you mean that you can't compile anything >> which uses GCC 11.2.0 or earlier? If so, why not? >> >> Whether or not you use Ubuntu 22.04 should not make a difference. No >> matter what version of GCC the operating system provides, you should >> still be able to build toolchains with later versions. For example, >> the >> default version of GCC on our system is 4.8.5, but we have software >> built with versions 7.3.0 to 12.2.0. >> >> Or have I misunderstood your problem? >> >> Cheers, >> >> Loris >> > -- Dr. Loris Bennett (Herr/Mr) ZEDAT, Freie Universität Berlin
