Dear All,
I am trying to install the pygtk2-py23 package and keep getting the following
error messages:
I've included most of the output to the terminal for easier diagnosis of the
problem, although clearly it has something to do with the docbook-xsl-1.68.1-1
package. I tried installing this seperately, but I get a very similar error
message.
Pick one: [1]
The following package will be installed or updated:
pygtk2-py23
The following 18 additional packages will be installed:
docbook-xsl gtk+2 gtk+2-dev gtk+2-shlibs gtk-doc gtkglarea2 gtkglarea2-shlibs
libglade2 libglade2-shlibs numeric-py23 openjade pango1 pango1-shlibs
pango1-xft2 pango1-xft2-dev pango1-xft2-shlibs python python23
Do you want to continue? [Y/n] Y
gzip -dc /sw/src/docbook-xsl-1.68.1.tar.gz | /sw/bin/tar -xf - --no-same-owner
--no-same-permissions
ls: _SW_PREFIX_/share/xtal/cns_solve_1.1/*/utils/plot_patterson: No such file or
directory
usage: dirname path
echo "Compile phase: nothing to do."
Compile phase: nothing to do.
/bin/rm -rf /sw/src/root-docbook-xsl-1.68.1-1
/bin/mkdir -p /sw/src/root-docbook-xsl-1.68.1-1/sw
/bin/mkdir -p /sw/src/root-docbook-xsl-1.68.1-1/DEBIAN
/var/tmp/tmp.1.AtVLva
1. Now edit either your ~/.bash_profile or ~/.cshrc file so it
sets the XML_CATALOG_FILES environment variable to include
/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml as its first
item; example:
# set XML_CATALOG_FILES for bash/ksh shell
export
XML_CATALOG_FILES="/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml
/sw/etc/xml/catalog"
IMPORTANT: Separate filenames in XML_CATALOG_FILES with spaces
2. If you have a CatalogManager.properties file, change the
"catalogs=" line in that file to something like:
catalogs=/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml;/sw/etc/xml/catalog
IMPORTANT: In that file, separate filenames with a SEMICOLON.
Also, make sure that your Java CLASSPATH contains the pathname
to the _directory_ containing CatalogManager.properties file.
3. If you're using a stylesheet customization layer, make sure
that it references the canonical URI for the DocBook
stylesheets; for example, use an xsl:import like this:
<xsl:import
href="http://docbook.sourceforge.net/release/xsl/current/html/chunk.xsl"/>
1. Now edit either your ~/.bash_profile or ~/.cshrc file so it
sets the XML_CATALOG_FILES environment variable to include
/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml as its first
item; example:
# set XML_CATALOG_FILES for bash/ksh shell
export
XML_CATALOG_FILES="/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml
/sw/etc/xml/catalog"
IMPORTANT: Separate filenames in XML_CATALOG_FILES with spaces
2. If you have a CatalogManager.properties file, change the
"catalogs=" line in that file to something like:
catalogs=/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml;/sw/etc/xml/catalog
IMPORTANT: In that file, separate filenames with a SEMICOLON.
Also, make sure that your Java CLASSPATH contains the pathname
to the _directory_ containing CatalogManager.properties file.
3. If you're using a stylesheet customization layer, make sure
that it references the canonical URI for the DocBook
stylesheets; for example, use an xsl:import like this:
<xsl:import
href="http://docbook.sourceforge.net/release/xsl/current/html/chunk.xsl"/>
cp: /sw/src/root-docbook-xsl-1.68.1-1/sw/share/doc/docbook-xsl: No such file or
directory
usage: cp [-R [-H | -L | -P]] [-f | -i | -n] [-pv] src target
cp [-R [-H | -L | -P]] [-f | -i | -n] [-pv] src1 ... srcN directory
usage: cp [-R [-H | -L | -P]] [-f | -i | -n] [-pv] src target
cp [-R [-H | -L | -P]] [-f | -i | -n] [-pv] src1 ... srcN directory
1. Now edit either your ~/.bash_profile or ~/.cshrc file so it
sets the XML_CATALOG_FILES environment variable to include
/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml as its first
item; example:
# set XML_CATALOG_FILES for bash/ksh shell
export
XML_CATALOG_FILES="/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml
/sw/etc/xml/catalog"
IMPORTANT: Separate filenames in XML_CATALOG_FILES with spaces
2. If you have a CatalogManager.properties file, change the
"catalogs=" line in that file to something like:
catalogs=/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml;/sw/etc/xml/catalog
IMPORTANT: In that file, separate filenames with a SEMICOLON.
Also, make sure that your Java CLASSPATH contains the pathname
to the _directory_ containing CatalogManager.properties file.
3. If you're using a stylesheet customization layer, make sure
that it references the canonical URI for the DocBook
stylesheets; for example, use an xsl:import like this:
<xsl:import
href="http://docbook.sourceforge.net/release/xsl/current/html/chunk.xsl"/>
/var/tmp/tmp.1.AtVLva: line 11:
/sw/src/root-docbook-xsl-1.68.1-1/sw/etc/xml/catalog.d/docbook-xsl-1.68.1: No
such file or directory
### execution of /var/tmp/tmp.1.AtVLva failed, exit code 1
Failed: installing docbook-xsl-1.68.1-1 failed
[bio-sln1:~] simonn%
Am I right in thinking that I need to follow these instructions?
Now edit either your ~/.bash_profile or ~/.cshrc file so it
sets the XML_CATALOG_FILES environment variable to include
/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml as its first
item; example:
# set XML_CATALOG_FILES for bash/ksh shell
export
XML_CATALOG_FILES="/sw/src/docbook-xsl-1.68.1-1/docbook-xsl-1.68.1/catalog.xml
/sw/etc/xml/catalog"
IMPORTANT: Separate filenames in XML_CATALOG_FILES with spaces
and if so, which of the .cshrc files do I edit, the one in / or the one in
/users/simonn/ (my home directory)? And how do I do this?
Many thanks for any help someone could give me on this!
best regards,
Simon.
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