Hi Koen, As already mentioned, I'm using v5.1.0, Mac Intel Leopard version. The voxel values of posterior_left_CA2-3.mgz and posterior_right_CA2-3.mgz are between 0 and 255, if that is what you mean by "results". By the way: I always get the 8 lines with "invalid drawable" messages from freeview.
Ed On 3 Apr 2012, at 21:29, Koen Van Leemput wrote: > Hi Ed, > > What version of the FreeSurfer build are you using? > > Also, could you please let me know what the result is of "ls > posterior_left_CA2*"? > > Thanks, > > Koen > > > > On Tue, Mar 27, 2012 at 8:29 AM, Ed Gronenschild > <ed.gronensch...@np.unimaas.nl> wrote: >> Hi, >> >> I followed the instructions to visualize the hippocampal subfield >> segmentation >> by entering the command (in the subject's mri directory) >> >> freeview nu.mgz \ >>> -p-labels posterior_left_* posterior_Left-Hippocampus.mgz \ >>> -p-labels posterior_right_* posterior_Right-Hippocampus.mgz \ >>> -p-prefix posterior_ -p-lut $FREESURFER_HOME/ >>> FreeSurferColorLUT.txt >> >> and got the following messages: >> >> 2012-03-27 11:54:37.043 freeview.bin[34414:907] invalid drawable >> 2012-03-27 11:54:37.083 freeview.bin[34414:907] invalid drawable >> 2012-03-27 11:54:37.154 freeview.bin[34414:907] invalid drawable >> 2012-03-27 11:54:37.156 freeview.bin[34414:907] invalid drawable >> 2012-03-27 11:54:37.168 freeview.bin[34414:907] invalid drawable >> 2012-03-27 11:54:37.170 freeview.bin[34414:907] invalid drawable >> 2012-03-27 11:54:37.182 freeview.bin[34414:907] invalid drawable >> 2012-03-27 11:54:37.184 freeview.bin[34414:907] invalid drawable >> QObject::connect: Connecting from QAbstractButton::toggled(bool) >> to COMPAT slot (QGroupBox::setShown(bool)) >> QObject::connect: Connecting from QAbstractButton::toggled(bool) >> to COMPAT slot (QGroupBox::setShown(bool)) >> CTABrgbAtIndexi: index -1 was OOB >> CTABrgbAtIndexi: index -1 was OOB >> Can not find index for color name left_CA2-3 >> CTABrgbAtIndexi: index -1 was OOB >> CTABrgbAtIndexi: index -1 was OOB >> CTABrgbAtIndexi: index -1 was OOB >> Can not find index for color name right_CA2-3 >> CTABrgbAtIndexi: index -1 was OOB >> >> Nothing was shown on top of nu.mgz. All the left and righ >> posterior files >> are present. >> >> (Mac OS X 10.6.8, FreeSurfer version 5.1.0) >> >> Cheers, >> Ed >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to >> whom it is >> addressed. If you believe this e-mail was sent to you in error and >> the e-mail >> contains patient information, please contact the Partners >> Compliance HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to >> you in error >> but does not contain patient information, please contact the >> sender and properly >> dispose of the e-mail. >> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
