Thanks. And can you also check which freesurfer build you're using? Look for the line that says "build-stamp" towards the beginning of your trac-all.log file.
On Wed, 2 Oct 2013, Lucia Billeci wrote:
Hi Anastasia These are the information: Mac OS X 10.7.5 Processor 3.4 Ghz Intel Core i7 Memory 4 GB 1333 MHz DD3 Lucia _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ Dr. Lucia Billeci, PhD Institute of Clinical Physiology (IFC) National Research Council (CNR) via Moruzzi 1, 56124, Pisa ITALY Tel: +39-0506213204 e-mail: lucia.bill...@ifc.cnr.it _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ Il giorno 02/ott/2013, alle ore 16:21, Anastasia Yendiki ha scritto: Hi Lucia - Glad to hear the bvecs problem got solved. About the memory problem: Can you please click on the apple on the top left of your screen and go to "About This Mac" and give me the info on the little window that pops up? Thanks, a.y On Wed, 2 Oct 2013, Lucia Billeci wrote: Dear Anastasia, using the command you told me I solved the problem with the bvecs file, however I get this error dmri_train(8994) malloc: *** mmap(size=159744) failed (error code=12) *** error: can't allocate region *** set a breakpoint in malloc_error_break to debug MRIalloc(218, 182, 182): could not allocate 158704 bytes for 14th slice Cannot allocate memory Darwin dhcp-71-112.ifc.cnr.it 11.4.2 Darwin Kernel Version 11.4.2: Thu Aug 23 16:25:48 PDT 2012; root:xnu-1699.32.7~1/RELEASE_X86_64 x86_64 trac-preproc exited with ERRORS at Wed Oct 2 10:04:53 CEST 2013 Is it a memory problem? Do I need to change memory allocation? Thanks again. Lucia _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ Dr. Lucia Billeci, PhD Institute of Clinical Physiology (IFC) National Research Council (CNR) via Moruzzi 1, 56124, Pisa ITALY Tel: +39-0506213204 e-mail: lucia.bill...@ifc.cnr.it _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ Il giorno 27/set/2013, alle ore 18:08, Anastasia Yendiki ha scritto: Hi Lucia - The bvecs file is full of "0,0000000". I'm guessing the problem is that your environment is set to use the comma instead of the point as the decimal separator. Can you try this and then rerun? setenv LANG en_US.UTF-8 Hope this helps, a.y On Fri, 27 Sep 2013, Lucia Billeci wrote: Hi Anastasia here are the files Thanks Lucia The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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