Thanks. And can you also check which freesurfer build you're using? Look for the line that says "build-stamp" towards the beginning of your trac-all.log file.

On Wed, 2 Oct 2013, Lucia Billeci wrote:

Hi Anastasia
These are the information:

Mac OS X 10.7.5
Processor    3.4 Ghz Intel Core i7
Memory    4 GB 1333 MHz DD3


Lucia


_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _

Dr. Lucia Billeci, PhD
Institute of Clinical Physiology (IFC)
National Research Council (CNR)
via Moruzzi 1, 56124, Pisa
ITALY
Tel: +39-0506213204
e-mail: lucia.bill...@ifc.cnr.it
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 




Il giorno 02/ott/2013, alle ore 16:21, Anastasia Yendiki ha scritto:


      Hi Lucia - Glad to hear the bvecs problem got solved.

      About the memory problem: Can you please click on the apple on
      the top left of your screen and go to "About This Mac" and give
      me the info on the little window that pops up?

      Thanks,
      a.y

      On Wed, 2 Oct 2013, Lucia Billeci wrote:

            Dear Anastasia,


            using the command you told me I solved the problem
            with the bvecs file, however I get this error


            dmri_train(8994) malloc: *** mmap(size=159744)
            failed (error code=12)

            *** error: can't allocate region

            *** set a breakpoint in malloc_error_break to debug

            MRIalloc(218, 182, 182): could not allocate 158704
            bytes for 14th slice


            Cannot allocate memory

            Darwin dhcp-71-112.ifc.cnr.it 11.4.2 Darwin Kernel
            Version 11.4.2: Thu Aug 23 16:25:48 PDT 2012;
            root:xnu-1699.32.7~1/RELEASE_X86_64 x86_64


            trac-preproc exited with ERRORS at Wed Oct  2
            10:04:53 CEST 2013


            Is it a memory problem? Do I need to change memory
            allocation?


            Thanks again.


            Lucia



            _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _


            Dr. Lucia Billeci, PhD

            Institute of Clinical Physiology (IFC)

            National Research Council (CNR)

            via Moruzzi 1, 56124, Pisa

            ITALY

            Tel: +39-0506213204

            e-mail: lucia.bill...@ifc.cnr.it

            _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _





            Il giorno 27/set/2013, alle ore 18:08, Anastasia
            Yendiki ha scritto:



                  Hi Lucia - The bvecs file is full of
                  "0,0000000". I'm guessing the problem is
                  that your environment is set to use the
                  comma instead of the point as the
                  decimal separator. Can you try this and
                  then rerun?


                  setenv LANG en_US.UTF-8


                  Hope this helps,

                  a.y


                  On Fri, 27 Sep 2013, Lucia Billeci
                  wrote:


                        Hi Anastasia


                        here are the files


                        Thanks

                        Lucia







                  The information in this e-mail is
                  intended only for the person to whom it
                  is

                  addressed. If you believe this e-mail
                  was sent to you in error and the e-mail

                  contains patient information, please
                  contact the Partners Compliance HelpLine
                  at

                  http://www.partners.org/complianceline .
                  If the e-mail was sent to you in error

                  but does not contain patient
                  information, please contact the sender
                  and properly

                  dispose of the e-mail.








_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to