Hi Ye, have you looked at the mris_preproc help? You can access it with mris_preproc --help. Let me know if that does not answer your questions
doug



On 4/6/14 6:09 PM, ye tian wrote:
Hello Freesurfers,

I understand that the output of "mris_preproc" can be the input of "mris_glmfit". In mris_glmfit, a GLM is performed.

Does "mris_preproc" give you a smoothed average of all the subjects?
If that's the case, how can you perform a GLM with just the average? Don't you need the data (smoothed or not) of all subjects?

Thank you very much!

Sincerely,
Ye


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