Dear Doug, These files typically end with .mgh. I tired opening them with text editors and them typically give a file of unreadable characters like:
@&駺9<窣,@!礱@ ^@$圚@萗@.?@6%@.溋@*>鳣!址@+?@!编@3岰@ 祺@€錊7]@>@<E褸%N(?錹?諕驚]Z@?蔮@0MU@'灔 @+緌@2Pq@ %?@7?@*y7@ @,?y@ Sincerely, Ye On Wed, Jun 18, 2014 at 12:40 PM, Douglas Greve <[email protected]> wrote: > It is just a script so you can view it with any text editor > doug > > > On 6/18/14 7:15 PM, ye tian wrote: > > Hello Freesurfers, > > Is there a way that I can take a look at the content of the output of " > mris_preproc"? > > Thank you very much! > > Sincerely, > Ye > > > On Sun, Apr 6, 2014 at 5:33 PM, ye tian <[email protected]> wrote: > >> Dear Doug, >> >> Thank you very much! >> >> Sincerely, >> Ye >> >> >> On Sun, Apr 6, 2014 at 5:32 PM, Douglas Greve <[email protected]> >> wrote: >> >>> It resamples them to a common space (the "average" subject) but does >>> not average them together. The result is a "stack" which is a single file >>> with multiple subject it in it ready for GLM analysis >>> doug >>> >>> >>> >>> On 4/6/14 6:18 PM, ye tian wrote: >>> >>> Dear Doug, >>> >>> Thank you, but I am only more confused after reading the summary. The >>> summary basically reaffirms my understanding that "mris_preproc" gives "an >>> average subject". How can this be an appropriate "data" for GLM, which for >>> sure needs multiple data points? >>> >>> Thank you! >>> >>> Sincerely, >>> Ye >>> >>> >>> On Sun, Apr 6, 2014 at 5:12 PM, Douglas Greve <[email protected] >>> > wrote: >>> >>>> Hi Ye, have you looked at the mris_preproc help? You can access it >>>> with mris_preproc --help. Let me know if that does not answer your >>>> questions >>>> doug >>>> >>>> >>>> >>>> >>>> >>>> On 4/6/14 6:09 PM, ye tian wrote: >>>> >>>> Hello Freesurfers, >>>> >>>> I understand that the output of "mris_preproc" can be the input of >>>> "mris_glmfit". In mris_glmfit, a GLM is performed. >>>> >>>> Does "mris_preproc" give you a smoothed average of all the subjects? >>>> If that's the case, how can you perform a GLM with just the average? >>>> Don't you need the data (smoothed or not) of all subjects? >>>> >>>> Thank you very much! >>>> >>>> Sincerely, >>>> Ye >>>> >>>> >>>> _______________________________________________ >>>> Freesurfer mailing >>>> [email protected]https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>>> >>>> >>>> >>>> _______________________________________________ >>>> Freesurfer mailing list >>>> [email protected] >>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>>> >>>> >>>> The information in this e-mail is intended only for the person to whom >>>> it is >>>> addressed. If you believe this e-mail was sent to you in error and the >>>> e-mail >>>> contains patient information, please contact the Partners Compliance >>>> HelpLine at >>>> http://www.partners.org/complianceline . If the e-mail was sent to you >>>> in error >>>> but does not contain patient information, please contact the sender and >>>> properly >>>> dispose of the e-mail. >>>> >>>> >>> >>> >>> _______________________________________________ >>> Freesurfer mailing >>> [email protected]https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> [email protected] >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> The information in this e-mail is intended only for the person to whom >>> it is >>> addressed. If you believe this e-mail was sent to you in error and the >>> e-mail >>> contains patient information, please contact the Partners Compliance >>> HelpLine at >>> http://www.partners.org/complianceline . If the e-mail was sent to you >>> in error >>> but does not contain patient information, please contact the sender and >>> properly >>> dispose of the e-mail. >>> >>> >> > > > _______________________________________________ > Freesurfer mailing > [email protected]https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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