Hello Freesurfers, Is there a way that I can take a look at the content of the output of " mris_preproc"?
Thank you very much! Sincerely, Ye On Sun, Apr 6, 2014 at 5:33 PM, ye tian <[email protected]> wrote: > Dear Doug, > > Thank you very much! > > Sincerely, > Ye > > > On Sun, Apr 6, 2014 at 5:32 PM, Douglas Greve <[email protected]> > wrote: > >> It resamples them to a common space (the "average" subject) but does not >> average them together. The result is a "stack" which is a single file with >> multiple subject it in it ready for GLM analysis >> doug >> >> >> >> On 4/6/14 6:18 PM, ye tian wrote: >> >> Dear Doug, >> >> Thank you, but I am only more confused after reading the summary. The >> summary basically reaffirms my understanding that "mris_preproc" gives "an >> average subject". How can this be an appropriate "data" for GLM, which for >> sure needs multiple data points? >> >> Thank you! >> >> Sincerely, >> Ye >> >> >> On Sun, Apr 6, 2014 at 5:12 PM, Douglas Greve <[email protected]> >> wrote: >> >>> Hi Ye, have you looked at the mris_preproc help? You can access it with >>> mris_preproc --help. Let me know if that does not answer your questions >>> doug >>> >>> >>> >>> >>> >>> On 4/6/14 6:09 PM, ye tian wrote: >>> >>> Hello Freesurfers, >>> >>> I understand that the output of "mris_preproc" can be the input of >>> "mris_glmfit". In mris_glmfit, a GLM is performed. >>> >>> Does "mris_preproc" give you a smoothed average of all the subjects? >>> If that's the case, how can you perform a GLM with just the average? >>> Don't you need the data (smoothed or not) of all subjects? >>> >>> Thank you very much! >>> >>> Sincerely, >>> Ye >>> >>> >>> _______________________________________________ >>> Freesurfer mailing >>> [email protected]https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> [email protected] >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> The information in this e-mail is intended only for the person to whom >>> it is >>> addressed. If you believe this e-mail was sent to you in error and the >>> e-mail >>> contains patient information, please contact the Partners Compliance >>> HelpLine at >>> http://www.partners.org/complianceline . If the e-mail was sent to you >>> in error >>> but does not contain patient information, please contact the sender and >>> properly >>> dispose of the e-mail. >>> >>> >> >> >> _______________________________________________ >> Freesurfer mailing >> [email protected]https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> [email protected] >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> >> >
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