Thanks for your help on this! It was a corruption problem, just as you said- didn't seem to be a disk space problem, but I deleted the file, re-ran, and things went fine.
Cheers Ben _______________________ Ben Smith, MSc. Ph.D. Candidate University of Southern California https://bjsmith.github.io/ w | +1 213-740 7851 m | +1 323-385 9349 skype | ben.smith.nz On Mon, Feb 19, 2018 at 9:11 AM, Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote: > Hi Ben > > we find the CC as the region where there is the largest left/right WM > connection. We then orient it to be vertical and find principle directions, > and divvy it up into however many segments you want (I think the default is > 5 but this can be changed). We then grow it out laterally as far as your > specify > > cheers > Bruce > > > On Mon, 19 Feb > 2018, Benjamin Yeske wrote: > > > Hello Freesurfer Experts, > > I was looking through your website to see if I could find any > info/papers that explained what > > landmarks you use for segmenting the corpus callosum, but I couldn't > find anything on the topic. > > Could you please point me to a paper or resource that explains how > freesurfer captures the corpus > > callosum and what landmarks it use to segment it out? We'd like to be > able to hand check this region > > for accuracy in our TBI patients brain scans. > > > > Thank you, > > Ben > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
