External Email - Use Caution Hi Reuben,
What template are you trying to use? Regards, Thomas On Tue, Aug 9, 2022 at 8:39 PM Addison, Reuben <[email protected]> wrote: > > > I want to use a different template apart from the MNI for my parcellation > (Yeo_JNeurophysiol11_FreeSurfer.zip). Below are the instructions given in > the readme. My question is – do I need to run this code before Recon-all or > after > > > > In terminal (ASSUMING shell is bash), > > a) "cd" to unzipped folder containing this README file, fsaverage, > fsaverage6, fsaverage5 > > b) export SUBJECTS_DIR=`pwd` > > c) tksurfer fsaverage5 lh inflated -annotation > fsaverage5/label/lh.Yeo2011_7Networks_N1000.annot > > > > > > > > Reuben A. > _______________________________________________ > Freesurfer mailing list > [email protected] > https://secure-web.cisco.com/14BSO78GWppkTSRxKy0_i21J54-E8l5zZEm_fmrcGsTk5kdPqWEMlcdurhaFzwcXEUJxf_Ua-Mb4G-EjPqolSOyfPp3L-2iazGuf1ZiXH7PrunKUL-vDO0vylguwgxRcHhyn_LMatCC5B5i7b0BT99mTDw8bJLNpC4luB-CHTRDezMvrGno9aLbajAfIA7RpfOQEes3940XLdioVzOBgkcjXmsNaRPVzeY8vG0UQGOZ_wtDPnBYwtWhyXmKPu8vJWJYfrrdieXNDa6bjpaBQCtTuM94YwvtpQfzKJl7o4zr7N9qOgvS7OmGriFKlOEmmMYH7Xc-_QLkOWO8O0VwkL5g/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > The information in this e-mail is intended only for the person to whom it > is addressed. If you believe this e-mail was sent to you in error and the > e-mail contains patient information, please contact the Mass General > Brigham Compliance HelpLine at > https://secure-web.cisco.com/1xSShaGz-dpcP-PLGR28kIpu-3fSoQL4tbE_iu8A44CCg4NaYMVbQs-xmQnbwekrjTSL_HCgfxKztCKV1NxXGvj7E6uxBq5U700tWPWjSkJbPYPaPxBkHGYem5RV500zrfrFO6TxoHXTz3F7jmcvIXjlrWqDbl29UDs8QrIEReEJ52Fo2K1JI7hlYPMywQsq-vg3-80k3H75KSFM-VxaYEeKCvGeElxlzzYXC2xEtuHhCS1TtpqrbKynoq1CAMEaOcpdzaZLZ4bpaIvMHofYJqY3c8m9px1mAnfzEg2hIRgYPIgPo0qmnv7kf88wWUyI3t1XqSAOMapEgW0hL4oim0A/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline > < > https://secure-web.cisco.com/1xSShaGz-dpcP-PLGR28kIpu-3fSoQL4tbE_iu8A44CCg4NaYMVbQs-xmQnbwekrjTSL_HCgfxKztCKV1NxXGvj7E6uxBq5U700tWPWjSkJbPYPaPxBkHGYem5RV500zrfrFO6TxoHXTz3F7jmcvIXjlrWqDbl29UDs8QrIEReEJ52Fo2K1JI7hlYPMywQsq-vg3-80k3H75KSFM-VxaYEeKCvGeElxlzzYXC2xEtuHhCS1TtpqrbKynoq1CAMEaOcpdzaZLZ4bpaIvMHofYJqY3c8m9px1mAnfzEg2hIRgYPIgPo0qmnv7kf88wWUyI3t1XqSAOMapEgW0hL4oim0A/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline> > . > Please note that this e-mail is not secure (encrypted). If you do not > wish to continue communication over unencrypted e-mail, please notify the > sender of this message immediately. Continuing to send or respond to > e-mail after receiving this message means you understand and accept this > risk and wish to continue to communicate over unencrypted e-mail. >
_______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
