The Yeo et al, 2011 template

Reuben A.

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________________________________
From: [email protected] 
<[email protected]> on behalf of Thomas Yeo 
<[email protected]>
Sent: Sunday, August 14, 2022 6:59:51 PM
To: Freesurfer support list <[email protected]>
Subject: Re: [Freesurfer] Parcellation issue


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Hi Reuben,

What template are you trying to use?

Regards,
Thomas

On Tue, Aug 9, 2022 at 8:39 PM Addison, Reuben 
<[email protected]<mailto:[email protected]>> wrote:



I want to use a different template apart from the MNI for my parcellation 
(Yeo_JNeurophysiol11_FreeSurfer.zip). Below are the instructions given in the 
readme. My question is – do I need to run this code before Recon-all or after



In terminal (ASSUMING shell is bash),

   a) "cd" to unzipped folder containing this README file, fsaverage, 
fsaverage6, fsaverage5

   b) export SUBJECTS_DIR=`pwd`

   c) tksurfer fsaverage5 lh inflated -annotation 
fsaverage5/label/lh.Yeo2011_7Networks_N1000.annot







Reuben A.

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