Russ, 

 

I was checking my email one last time before getting on plane to Houston (oh
Joy, oh rapture!), when the weekly notice of talks at SFI came walking in
the door.  I thought as a kind of a test over everybody's enthusiasm for the
concept of causality, I might post the first few sentences of the abstract
of the talk: 

 

In this talk, I propose an approach to understanding the foundations of
physics by considering the optimal inferences an intelligent agent can make
about the universe in which he or she is embedded.  Information acts to
constrain an agent's beliefs.  However, at a fundamental level, any
information is obtained from interactions where something influences
something else.

 

And ask the question, How many references to causality do you see in this
passage.  I see two.  

 

Have a great week. 

 

Nick 

From: Friam [mailto:[email protected]] On Behalf Of Russ Abbott
Sent: Monday, March 25, 2013 11:05 PM
To: The Friday Morning Applied Complexity Coffee Group
Subject: Re: [FRIAM] beyond reductionism twice

 

Nick,

 

You're the scientist; I'm only a computer scientist. So you are more
qualified to talk about science and cause. 

 

Do you think science organizes its theories in terms of causes? I see
equations, entities, structures, geometries, and mechanisms, but I don't see
causes. As I'm sure you know, the notion of "cause" is very slippery. I
think science is better off without it. 

 

But I'm interested in your perspective. What do you think?

 

 
<https://app.yesware.com/t/ac60524099a2c2922efb3fea7fcd30ecf03a1482/851f757a
2285823ad6d3350e1f01df84/spacer.gif>
<http://app.yesware.com/t/ac60524099a2c2922efb3fea7fcd30ecf03a1482/851f757a2
285823ad6d3350e1f01df84/spacer.gif> [If this is a thread hijack, I
apologize. I am very interested in the subject, though.]

 
<https://app.yesware.com/t/ac60524099a2c2922efb3fea7fcd30ecf03a1482/9e8cb4a2
ede661bd0c79d43ed37f8b20/spacer.gif>
<http://app.yesware.com/t/ac60524099a2c2922efb3fea7fcd30ecf03a1482/9e8cb4a2e
de661bd0c79d43ed37f8b20/spacer.gif> 




 

-- Russ Abbott
_____________________________________________

  Professor, Computer Science
  California State University, Los Angeles

 

  My paper on how the Fed can fix the economy: ssrn.com/abstract=1977688
  Google voice: 747-999-5105

  Google+: plus.google.com/114865618166480775623/

  vita:   <http://sites.google.com/site/russabbott/>
sites.google.com/site/russabbott/

  CS Wiki <http://cs.calstatela.edu/wiki/>  and the courses I teach
_____________________________________________ 

 

On Mon, Mar 25, 2013 at 10:02 PM, Steve Smith <[email protected]> wrote:

Russ -

 

Steve, you mentioned Lamarkian evolution. I'd be very interested to find out
more about some of your daughter's examples. 

This was on a long drive from NM to OR last Thanksgiving... in the course of
about 30 hours of driving we talked about a LOT of things.  

I am pretty sure this first exmaple is merely "neo-Lamarckian" or
"Lamarckianesque" as they only applied to the single next generation.  The
germline of the child does not carry the changes, although if the child
experiences the same conditions the parent did, the same epigenetic
mechanisms would be in effect in the subsequent generation.  This example
had to to do with Long Term Potentiation (a feature of neural connectivity).
What surprised me most was that this particular example involved the
female/mother/eggs which are not manufactured "on the fly".  It seems more
likely that the father/male/sperm would be prone to this type of effect?
There may have been two sub-examples, one about memory and one about "bad
mothering"?

A more Lamarckian example was, I think, in Roundworms and involved RNA
interference.  The result (minus the details) was something like hereditible
immunity.

A parallel example I *can* remember was the case of Tasmanian Devils and
what is known as DFTD for Devil Facial Tumor Disease.   Apparently it is an
*infectuous* cancer (non-viral, meaning it isn't about a virus transferring
from one host to another, then causing cancer).   A cancerous cell from one
individual literally becomes part of the other individual's organism... like
an accidental organ donation or skin graft.   Apparently the Devils are
prone to lots of scrapping with each other and when one with a tumor on it's
face scraps with one without, a cancerous cell (or cells) can get
transferred to from the skin of one to the other and it can in fact 'graft'
right into the epithelial layer.  I don't know if this is more common/likely
because it is cancerous, or if Devils were already exchanging skin cells
before this cancer emerged?

The point of this Tasmanian Devil example is that it is as unexpected (to me
anyway) as examples of Lamarckian evolution would be.  



 

 

-- Russ Abbott
_____________________________________________ 

  Professor, Computer Science
  California State University, Los Angeles

 

  My paper on how the Fed can fix the economy: ssrn.com/abstract=1977688
  Google voice: 747-999-5105

  Google+: plus.google.com/114865618166480775623/

  vita:   <http://sites.google.com/site/russabbott/>
sites.google.com/site/russabbott/

  CS Wiki <http://cs.calstatela.edu/wiki/>  and the courses I teach
_____________________________________________ 

 

On Mon, Mar 25, 2013 at 3:42 PM, Steve Smith <[email protected]> wrote:

Gary/Pamela/(Stephen, Carl, Eric, ...) -

I know several (many?) on this list know Stu better than I... so I apologize
if I sounded overly critical.  I prefer Pamela's description of him being
*careless* with references as opposed to my own use of the *honest*.   I
also admit that I do not know if he sees himself as a rock-star... that is
perhaps the default category I put people in who are simultaneously *good*,
*self-possessed* and *charismatic*.   I actually *like* most rock stars
(within reason) even if I might not care for their music.

As an aside... does anyone remember Chris Langton appearing in Rolling Stone
(CA 1990?)... I searched their archives and did not find any references (nor
on the internet at large?).   I remember the article including a sexed-up
spread of him in front of a Connection Machine?  I suppose I could be
hallucinating or have come from an alternate history?

I also smiled at your term "demigod" as I often use "Titans" to describe the
pantheon of my wife's sibling group...  she is oldest of 8 *mostly* high
functioning, *very* charismatic, *definitely* self-possessed siblings.
They all revered their father who was a humble but charismatic physics
professor.  None of them took up science per se, though one has a PhD in
psychology.  I would not use *rock star* to describe any of their
self-image, though there is one who insists he *is* Elvis... and sometimes
we are tempted to believe him.  There are definitely characters right out of
Greek, Roman, Norse, even Hindu mythology in her family... My wife is Kali
*and* Loki rolled into one I think.

I have always been inspired by Kauffman's ideas as best I could understand
them, which has been highly variable, depending on the circumstance.  This
says more about me than about Stu.  I read his lecture notes in the
late-nineties... the ones which ultimately became the core of
_Investigations_ (or so it seemed to me).  I had read _OofO_ and _At Home in
the Universe_ previously.  It may have been coincidence or something
stronger like kismet that I read Investigations interleaved with my reading
of Christopher Alexander's (Pattern Language fame) _Notes on the Synthesis
of Form_ with D'Arcy Thompson's _On Growth and Form_ as backup reference.  I
was traveling lightly in New Zealand at the time with none of my usual
distractions nagging me.  It was a month of deep thought informed by
Alexander and Kauffman equally.

My nature is to be guarded around people with significant charisma (and me
married into aforementioned pantheon!).  I appreciate the need for and the
value of the persuasive and the self-confident, even in the realm of science
where ideas *by definition* must stand on their own.  There is value for
those who can bring us to *want* to believe enough to put in the hard work
to believe things on their own merits.  Unfortunately that might be the
dividing line between science and Science(tm).   I suppose I mistrust those
who appear to be trying to corner the franchise on Science(tm) in their
neighborhood.

Nevertheless, I am *more* interested in Kauffman's ideas here and hope that
we will discuss them a bit?

- Steve 





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