I've created the following ticket for this which you can follow if you want.

https://bitbucket.org/galaxy/galaxy-central/issue/492/add-the-ability-to-display-purged-history

Thanks for all of your input,

greg Von Kuster


On Mar 14, 2011, at 2:30 PM, Sebastian J. Schultheiss wrote:

> Dear all,
> 
> 
>> We use the following query to see if a dataset is shared between more than 
>> one history:
>> select
>>  count(*)
>> from
>>  history_dataset_association hda
>> where hda.dataset_id=NNNNN
>> 
>> And the following to see if it's shared between more than one user:
>> ==
>> select
>> count ( distinct history.user_id )
>> from
>> history,
>> dataset,
>> history_dataset_association hda
>> where
>> dataset.id = hda.dataset_id
>> AND
>> history.id = hda.history_id
>> AND
>> dataset.id = NNNN
>> ==
> 
> 
> Thanks a lot for these helpful scripts. I've just tried some of them out and 
> they work wonderfully.
> 
>> Are there other types of sharing (between users) ?
> 
> You can gererally publish a history, so anyone can access it.
> 
>> I'm not sure about the best UI way of displaying those purged datasets,
>> but something like showing the datasets just like the current green 
>> rectangles (or the way deleted datasets are displayed, with a warning),
>> showing the user what was the analysis, the tools, the parameters,
>> and if/when the user clicks on the "eye" icon or the "download" icon, he 
>> will get a message saying "this dataset has been purged".
> 
> --- or an option to rerun all the tools to get this dataset again.
> 
>> But he will still be able to "re-run" or view the tool's parameters.
>> 
>> The rational behind this:
>> I'm in the same situation as Sebastian - I have users running big jobs, on 
>> many FASTQ files, on crazy datasets (example: Genomics Interval's "Join" on 
>> two 300MB BED files, producing a 70GB file, then filtering the results with 
>> GREP, or 8 x PE100 FASTQ files that go throw the same workflow). Many times 
>> they don't need the intermediate files, but never bother to delete them 
>> (this was before the workflows had an option to delete intermediate files, 
>> and even now not many people are using this feature - and I can't force 
>> them).
> 
> This could be the default... especially if the GUI provies a way to "restore" 
> or re-generate the intermediates
> 
>> Having a way to display the meta-data of a purged dataset (especially since 
>> each dataset has a "peek" and "info" data) would be very helpful (helpful - 
>> but not top priority - I don't want to create the wrong impression).
> 
> True, I'm sure there are more pressing things. However, you could put it on 
> the nice-to-have list or do a minimal implementation like the ones that show 
> up like deleted datasets. An expiration date may be very hard to implement.
> 
> Thanks again!
> 
> -- Sebastian
> 
> 
> 
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Greg Von Kuster
Galaxy Development Team
g...@bx.psu.edu




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