Dear Alex,
Thanks a lot for your useful information.

--Bo

On Mon, Aug 1, 2011 at 5:18 AM, Bossers, Alex <alex.boss...@wur.nl> wrote:
> You can also directly link the R script in the galaxy-tool.
> We have many of those. For testing (NOT SAFE!) we also have a tool that 
> allows the upload of an R script for testing purposes....
> See the arhives for more extensive discussion...
> <command>
>       R --slave --vanilla --file=$GALAXY_ROOT_DIR/tools/somedir/somescript.R 
> --args $input1 $options $output1
>  </command>
>
> http://gmod.827538.n3.nabble.com/Re-galaxy-user-plugging-R-into-galaxy-td1878734.html#a1889899
>
> Good luck!
>
> Alex
>
>
> ________________________________________
> Van: galaxy-dev-boun...@lists.bx.psu.edu 
> [galaxy-dev-boun...@lists.bx.psu.edu] namens liu bo [liub...@gmail.com]
> Verzonden: zaterdag 30 juli 2011 6:49
> Aan: galaxy-dev@lists.bx.psu.edu
> Onderwerp: [galaxy-dev] Does Galaxy have a tool to run R script?
>
> Dear all,
>
> I want to build a Galaxy tool to run R script.
> Do you know if there is already such tool or similar function?
> If you can share with me, I would very appreciate your help.
>
> Thank you,
> Bo Liu
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