Thanks Vipin. I think I understand enough for now! On Nov 28, 2011, at 3:51 PM, Vipin TS wrote:
> Hi Kipper, > > Sorry I got confused, Yes you are right, both ways are fine I think. > > --Vipin > > > Vipin, > > Thanks for quick reply. Pardon my asking, as I said I am new to Galaxy > development, but if I wanted to share my module, would other users need to > install Shogun separately, or could I include it as a dependency or 'egg'? > > > > On Nov 28, 2011, at 2:28 PM, Vipin TS <vipin...@gmail.com> wrote: > >> Dear Kipper, >> >> We are running most of our tools with the help of Shogun toolbox. Just >> configure a recent version of Shogun toolbox to your local machine and add >> the python path to your program. By doing this you will be able to call >> shogun functionalities in your programs. (Depends on the configuring path >> you will be able to find the shared object file and main library files) >> Recent version of shogun can be find at >> ftp://shogun-toolbox.org/shogun/releases/1.0/sources/shogun-1.0.0.tar.bz2 >> >> HTH, >> Vipin >> Friedrich Miescher Laboratory >> of the Max Planck Society >> Spemannstrasse 39, 72076 >> Tuebingen, Germany >> >> >> Dear List, >> >> I am new to developing for Galaxy and haven't found a good answer to this >> question yet. Does Galaxy Test Toolshed use or recognize Shogun Toolbox >> (http://www.shogun-toolbox.org/)? I'm considering writing a module for >> Galaxy, but the underlying Python code relies on Shogun, and I haven't seen >> a suppported 3rd party software list, so I can't tell if Galaxy would be >> able to run the module without my rewriting it not to depend on Shogun. >> >> Thank you, >> Kipper Fletez-Brant >> ___________________________________________________________ >> Please keep all replies on the list by using "reply all" >> in your mail client. To manage your subscriptions to this >> and other Galaxy lists, please use the interface at: >> >> http://lists.bx.psu.edu/ >> >
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