This is the problem - it's unclear how your local tool shed environment is missing this file as it must have been generated the first time your started your tool shed application ( via sh run_community.sh ). Since this file does not exist, you must not yet have created any repositories, so manually create the file with contents like this, and you should be able to create a repository.
[paths] If you have created repositories in the past, then this file must have been inadvertently removed from disk, so you'll have to add entries for each repository you have on disk, something like this. [paths] repos/test/filter = database/community_files/000/repo_1 ... where "test" is replaced with your reppository owner, "filter" is replaced with your repository name, and the path is replaced with your repository path. If you don't care about keeping your repositories on disk (if you in fact have any), you can delete them, and create the hgeweb.config file with just the [paths] setting and no entries. This will result in a new, pristine tool shed environment. Greg Von Kuster On Apr 2, 2012, at 10:38 AM, Joachim Jacob wrote: > I am sorry, but I do not have a hgweb.config file in the install dir. > > On 04/02/2012 04:23 PM, Greg Von Kuster wrote: >> It should be in your Galaxy installation directory, and your on-disk >> repositories will be in a directory under the setting you've defined for the >> "file_path" configuration in your community_wsgi.ini file. >> >> >> On Apr 2, 2012, at 10:17 AM, Joachim Jacob wrote: >> >>> Hi Greg, >>> >>> >>> If it is most likely a configuration error, I will check my settings, and >>> let you know my progress. >>> >>> But one note: I do not have a hgweb.config file. Where is it supposed to >>> reside? I cannot find this info on the toolshed wiki. >>> >>> >>> Joachim >>> >>> >>> On 04/02/2012 03:30 PM, Greg Von Kuster wrote: >>>> Hi Joachim, >>>> >>>> I've not seen this in any of my tool shed development environments, nor >>>> using the test or main Galaxy tool sheds, so it is unlikely that this is a >>>> bug. It looks more likely to be a configuration problem in your local >>>> tool shed environment. Do the repositories defined in your hgweb.config >>>> match those you have on disk? >>>> >>>> Greg Von Kuster >>>> >>>> On Apr 2, 2012, at 8:38 AM, Joachim Jacob wrote: >>>> >>>>> Hi all, >>>>> >>>>> On a local Toolshed freshly installed, I got these errors when browsing >>>>> my repository. >>>>> >>>>> Perhaps a bug? >>>>> >>>>> >>>>> Cheers, >>>>> Joachim >>>>> >>>>> >>>>> Server Error >>>>> >>>>> URL: >>>>> http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories<http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories>> >>>>> Module paste.exceptions.errormiddleware:*143* in |__call__| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>app_iter >>>>> *=* self*.*application*(*environ*,* start_response*)*| >>>>> Module paste.debug.prints:*98* in |__call__| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>environ*,* >>>>> self*.*app*)*| >>>>> Module paste.wsgilib:*539* in |intercept_output| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>app_iter >>>>> *=* application*(*environ*,* replacement_start_response*)*| >>>>> Module paste.recursive:*80* in |__call__| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>*return* >>>>> self*.*application*(*environ*,* start_response*)*| >>>>> Module paste.httpexceptions:*632* in |__call__| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>*return* >>>>> self*.*application*(*environ*,* start_response*)*| >>>>> Module galaxy.web.framework.base:*160* in |__call__| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>body >>>>> *=* method*(* trans*,* ****kwargs *)*| >>>>> Module galaxy.webapps.community.controllers.repository:*985* in >>>>> |browse_repositories| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>*return* >>>>> self*.*repository_list_grid*(* trans*,* ****kwd *)*| >>>>> Module galaxy.web.framework.helpers.grids:*277* in |__call__| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>kwargs*=*kwargs >>>>> *)*| >>>>> Module galaxy.web.framework:*722* in |fill_template| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>*return* >>>>> self*.*fill_template_mako*(* filename*,* ****kwargs *)*| >>>>> Module galaxy.web.framework:*733* in |fill_template_mako| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>*return* >>>>> template*.*render*(* ****data *)*| >>>>> Module mako.template:*296* in |render| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>*return* >>>>> runtime*.*_render*(*self*,* self*.*callable_*,* args*,* data*)*| >>>>> Module mako.runtime:*660* in |_render| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>****_kwargs_for_callable*(*callable_*,* >>>>> data*)**)*| >>>>> Module mako.runtime:*692* in |_render_context| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>_exec_template*(*inherit*,* >>>>> lclcontext*,* args*=*args*,* kwargs*=*kwargs*)*| >>>>> Module mako.runtime:*718* in |_exec_template| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>callable_*(*context*,* >>>>> ***args*,* ****kwargs*)*| >>>>> Module _base_mako:*42* in |render_body| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>__M_writer*(*unicode*(*next*.*body*(**)**)**)*| >>>>> Module _grid_base_mako:*119* in |render_body| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>__M_writer*(*unicode*(*self*.*grid_body*(* >>>>> grid *)**)**)*| >>>>> Module _grid_base_mako:*790* in |render_grid_body| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>__M_writer*(*unicode*(*self*.*make_grid*(* >>>>> grid *)**)**)*| >>>>> Module _grid_base_mako:*819* in |render_make_grid| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>__M_writer*(*unicode*(*self*.*render_grid_table*(* >>>>> grid*,* show_item_checkboxes *)**)**)*| >>>>> Module _grid_base_mako:*768* in |render_render_grid_table| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>__M_writer*(*unicode*(*render_grid_table_body_contents*(* >>>>> grid*,* show_item_checkboxes *)**)**)*| >>>>> Module _grid_base_mako:*664* in |render_grid_table_body_contents| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>*return* >>>>> >>>>> render_render_grid_table_body_contents*(*context*,*grid*,*show_item_checkboxes*)*| >>>>> Module _grid_base_mako:*322* in |render_render_grid_table_body_contents| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>value >>>>> *=* column*.*get_value*(* trans*,* grid*,* item *)*| >>>>> Module galaxy.webapps.community.controllers.repository:*84* in |get_value| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>select_field >>>>> *=* build_changeset_revision_select_field*(* trans*,* repository *)*| >>>>> Module galaxy.webapps.community.controllers.common:*992* in >>>>> |build_changeset_revision_select_field| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>repo >>>>> *=* hg*.*repository*(* get_configured_ui*(**)**,* repository*.*repo_path >>>>> *)*| >>>>> Module galaxy.webapps.community.controllers.common:*757* in >>>>> |get_configured_ui| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>_ui*.*setconfig*(* >>>>> 'ui'*,* 'quiet'*,* True *)*| >>>>> Module mercurial.ui:*113* in |setconfig| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>self*.*fixconfig*(**)*| >>>>> Module mercurial.ui:*100* in |fixconfig| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>self*.*quiet >>>>> *=* *not* self*.*debugflag *and* self*.*configbool*(*'ui'*,* 'quiet'*)*| >>>>> Module mercurial.ui:*134* in |configbool| >>>>> |>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories# >>>>> >>>>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>>*if* >>>>> v*.*lower*(**)* *not* *in* _booleans*:*| >>>>> *AttributeError: 'bool' object has no attribute 'lower' >>>>> * >>>>> >>>>> -- >>>>> Joachim Jacob, PhD >>>>> >>>>> Rijvisschestraat 120, 9052 Zwijnaarde >>>>> Tel: +32 9 244.66.34 >>>>> Bioinformatics Training and Services (BITS) >>>>> http://www.bits.vib.be >>>>> @bitsatvib >>>>> >>>>> >>>>> ___________________________________________________________ >>>>> Please keep all replies on the list by using "reply all" >>>>> in your mail client. To manage your subscriptions to this >>>>> and other Galaxy lists, please use the interface at: >>>>> >>>>> http://lists.bx.psu.edu/ >>
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
