[galaxy-dev] Getting error when trying to run CIRCSTER

[Anthonius deBoer]

Got this when trying CIRCSTER on latest galaxy-dist.

Does this mean my system does not know about certain genomes?

Trackster works fine...

Thon

Error Traceback:

View as:   Interactive  |  Text  |  XML (full)

⇝ TypeError: argument of type 'NoneType' is not iterable

URL: http://srv151/visualization/circster?dataset_id=241d84796a24640a&hda_ldda=hda

Module weberror.evalexception.middleware:364 in respond          view
>>  app_iter = self.application(environ, detect_start_response)

Module paste.debug.prints:98 in __call__          view
>>  environ, self.app)

Module paste.wsgilib:539 in intercept_output          view
>>  app_iter = application(environ, replacement_start_response)

Module paste.recursive:80 in __call__          view
>>  return self.application(environ, start_response)

Module galaxy.web.framework.middleware.remoteuser:91 in __call__          view
>>  return self.app( environ, start_response )

Module paste.httpexceptions:632 in __call__          view
>>  return self.application(environ, start_response)

Module galaxy.web.framework.base:160 in __call__          view
>>  body = method( trans, **kwargs )

Module galaxy.webapps.galaxy.controllers.visualization:748 in circster          view
>>  chroms_info = self.app.genomes.chroms( trans, dbkey=dbkey )

Module galaxy.visualization.genomes:210 in chroms          view
>>  dbkey_owner, dbkey = decode_dbkey( dbkey )

Module galaxy.visualization.genomes:24 in decode_dbkey          view
>>  if ':' in dbkey:

TypeError: argument of type 'NoneType' is not iterable

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