On Monday, February 4, 2013, Luobin Yang wrote: > Hi, Peter, > > Thanks for pointing them out! > > The phi-blast and psi-blast actually share the same binary, both use the > psiblast program in the NCBI BLAST+ tools. When the option -phi_pattern is > used, then it does phi-blast searching. > > Best, > Luobin > > > Could you give a few command line examples of how you typically use psiblast, focussing in the main options only?
I would find that helpful when putting together a new wrapper - since including all the options right away is overwhelming. Thanks, Peter
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