Hi Anto, Yes, you should be able to create an admin user for your galaxy installation via the cloudman admin panel (http://<your_ec2_instance>/cloud/admin) in as an admin. Once you're an admin user, you'll see the toolshed installation stuff in the galaxy admin panel.
-Dannon On Fri, Aug 16, 2013 at 6:03 AM, Anto Praveen Rajkumar Rajamani < a...@hum-gen.au.dk> wrote: > Hello, > > I launched a new Cloudman instance last week to analyse my RNA-seq data. > I uploaded and cleaned my data, but could not run Tophat and Cufflinks due > to the "Broken symbolic links" problem ( > https://bitbucket.org/galaxy/cloudman/issue/6/tool-default-symbolic-links-to-mnt > ). > I have completed running Tophat2 on the public server. > Now, I like to install edgeR ( > http://toolshed.g2.bx.psu.edu/repository?repository_id=0c447003da85ae19) > from the toolshed for further analyses. > I cannot find a way to install that tool in my cloudman instance. > My background is in psychiatry and I do not have any knowledge of Linux > commands. > Is there a way to install a tool (edgeR) from the toolshed without using > command lines? > Any help is greatly appreciated. > Thank you. > > Best wishes, > Anto > > > Anto Rajkumar, MD, DNB, MRCPsych, > PhD fellow, Department of Biomedicine, > Aarhus university, > 8000 C, Aarhus, Denmark. > Ph (office) : 045- 87167292 > E-mail: a...@hum-gen.au.dk > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > http://lists.bx.psu.edu/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ >
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
