Hello All,

I am trying to setup job submission to pbs server running on our
cluster.

I have python 2.7 installed in /usr/local along with easy_install. But
when trying to compile pbs_python I am getting following error:
[galaxy@galaxy galaxy-dist]$ LIBTORQUE_DIR=/usr/lib python
scripts/scramble.py -e pbs_python
fetch_one(): Trying to fetch:
  http://eggs.galaxyproject.org/pbs_python/pbs_python-4.3.5.tar.gz
fetch_one(): Fetched to:
  /home/galaxy/galaxy-dist/scripts/scramble/archives/pbs_python-4.3.5.tar.gz
unpack_source(): Unpacked to:
  
/home/galaxy/galaxy-dist/scripts/scramble/build/py2.7-linux-x86_64-ucs4/pbs_python
copy_build_script(): Using build
script /home/galaxy/galaxy-dist/scripts/scramble/scripts/pbs_python.py
run_scramble_script(): Beginning build
run_scramble_script(): Executing
in 
/home/galaxy/galaxy-dist/scripts/scramble/build/py2.7-linux-x86_64-ucs4/pbs_python:
  /home/galaxy/galaxy-python/python scramble.py
Traceback (most recent call last):
  File "scramble.py", line 14, in <module>
    from scramble_lib import *
  File "../../../lib/scramble_lib.py", line 146, in <module>
    from setuptools import *
  File "build/bdist.linux-x86_64/egg/setuptools/__init__.py", line 11,
in <module>
  File "build/bdist.linux-x86_64/egg/setuptools/extension.py", line 8,
in <module>
  File "build/bdist.linux-x86_64/egg/setuptools/dist.py", line 21, in
<module>
AttributeError: 'module' object has no attribute 'packaging'
Traceback (most recent call last):
  File "scripts/scramble.py", line 50, in <module>
    egg.scramble()
  File "/home/galaxy/galaxy-dist/lib/galaxy/eggs/scramble.py", line 57,
in scramble
    self.run_scramble_script()
  File "/home/galaxy/galaxy-dist/lib/galaxy/eggs/scramble.py", line 210,
in run_scramble_script
    raise ScrambleFailure( self, "%s(): Egg build failed for %s %s" %
( sys._getframe().f_code.co_name, self.name, self.version ) )
galaxy.eggs.scramble.ScrambleFailure: run_scramble_script(): Egg build
failed for pbs_python 4.3.5

I also tried setuptools-18.0.1 installed in user's local path but I am
still getting the same error.

It is Centos 6.6 OS. Any help would be appreciated.

-- 

Regards,

-- 
Zuzanna K. Filutowska, HPC Systems Administrator
Poznan Supercomputing and Networking Center
Institute of Bioorganic Chemistry Polish Academy of Sciences
Seize the day boys! Make your lifes extraordinary! --John Keating

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