Hi,

How do I run Tophat and RNA-Seq analysis using the GRCH37- embl 66 genome? I 
noticed there is no input for this genome version.

Can I construct a reference genome from the following embl format source 
sequences: ftp://ftp.ensembl.org/pub/release-66/embl/homo_sapiens/, and map it 
against my RNAseq data?

 

Regards,

Karthik

 

Karthik Srinivasan | Senior Application Engineer
P:HYPERLINK "tel:+912242554282"+912242554282 | M:HYPERLINK 
"tel:+919987014704"+919987014704 
Oracle Health Sciences Global Business Unit
6'th Floor, Silver Metropolis, W.E.Highway, Goregaon(E) | 400063 Mumbai 

                

 

 
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