Kristis, This data is available further downstream in an RNA-seq analysis pipeline, specifically, as output from the Cuffdiff tool. Take a look at the page for more details:
https://main.g2.bx.psu.edu/rna-seq Best, J. On Nov 9, 2012, at 3:42 AM, Vevis, Christis wrote: > Hi, > > I am performing online tophat on 5 different samples which I want to compare > for gene expression. Is there any simple way, after the end of tophat for all > of them, with which I can have an excel table with the 5 samples and their > hits? > > Something similar to this > Vevis1 > Vevis2 > Vevis3 > Vevis4 > Vevis5 > uc010kuo.1 > 128.8503 > 136.60553 > 146.7073 > 91.23218 > 120.325 > AK311687 > TRA2A > Homo sapiens transformer 2 alpha homolog (Drosophila) (TRA2A), mRNA. > Regards > > Kristis Vevis, PhD Student > Cell Biology > UCL Institute of Ophthalmology > 11-43 Bath Street > London > EC1V 9EL, UK > 020 7608 4067 > > ___________________________________________________________ > The Galaxy User list should be used for the discussion of > Galaxy analysis and other features on the public server > at usegalaxy.org. Please keep all replies on the list by > using "reply all" in your mail client. For discussion of > local Galaxy instances and the Galaxy source code, please > use the Galaxy Development list: > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > To manage your subscriptions to this and other Galaxy lists, > please use the interface at: > > http://lists.bx.psu.edu/
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
