Hi Ann, Now three weeks passed. I am just wondering whether you guys could release new assembly very soon.
Thanks for your reply ahead. Best regards, ------------------------------------------------------------- Yong Zhang Ph.D, Research Scholar Manyuan Long's Lab University of Chicago >------------------------------------------------------------- >From: Ann Zweig >Time: 2009-05-04 11:49:59 >To: pkuonline genome >Subject: Re: [Genome] data release of sacCer2 >Hello Yong Zhang, > >The sacCer2 assembly and tracks are in the final stages of our quality >assurance >process. Expect to see it on the public website in a couple of weeks. > >Regards, > >---------- >Ann Zweig >UCSC Genome Bioinformatics Group >http://genome.ucsc.edu > > > >pkuonline wrote: >> Dear Sir or Madam, >> >> The current stable version of yeast, sacCer1, is pretty old, since it was >> released six years ago. I noticed the updated version sacCer2 is already >> being developed based on the UCSC test website. I checked the document of >> sacCer2, "kent/src/hg/makeDb/doc/sacCer2.txt". It seems you guys already >> gets almost all things done, including new SGD genome assembly, new >> phastCons score, new gene annotation (both Ensembl and SGD), new EST/mRNA >> mapping and many others. As said above, since sacCer1 is too old, these new >> information is very helpful for my project. So I am just wondering when you >> could release this information. As of now, UCSC ftp site only has EST/mRNA >> mapping beds, ftp://hgdownload.cse.ucsc.edu/goldenPath/sacCer2/ . >> >> Thanks for your reply ahead. >> >> Best regards, >> ------------------------------------------------------------- >> Yong Zhang >> Ph.D, Research Scholar >> Manyuan Long's Lab >> University of Chicago >> >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
