Dear Pauline, Thank you. Now I understood what it means. And it's good to hear your plan for dbSNP b133 track.
Sincerely, Dennis Lee --------------------------------------- Seong-Yeon Lee Graduate Student Laboratory of Genomics & Genomic Medicine Lee Gil Ya Cancer and Diabetes Institute Gachon University of Medicine and Science Tel : +82 32 899 6545 Fax : +82 32 899 6519 Mobile : +82 10 7530 7004 e-mail : [email protected] --------------------------------------- On Wed, Apr 6, 2011 at 9:33 AM, Pauline Fujita <[email protected]> wrote: > Hello Dennis, > > The 5.2 build isn't exactly a new assembly but does include UMD 3.1. We do > plan to build a browser for UMD 3.1 and a dbSNP b133 track. > > Best regards, > > Pauline Fujita > UCSC Genome Bioinformatics Group > http://genome.ucsc.edu > > > On 03/29/11 23:18, Seong-yeon Lee wrote: > >> To whom this may concern, >> >> Hello, I am a student studying genomics about cow for the present in >> Korea. >> >> Recently NCBI began to offer the sequence maps for Bos taurus NCBI build >> 5.2 >> which include the reference assembly Btau_4.2 and an alternate assembly >> UMD_3.1. >> However, UCSC genome browser doesn't support it yet but upto Btau_4.0. >> We want to manipulate the dbSNP build 133 data of cow, the most recent >> one, >> but it is based on build 5.2. >> >> Because of the fact above, we courteously ask you for cow data build 5.2. >> Especially we need FASTA & GTF files of it. >> If you have a plan to provide Bos taurus genome build 5.2, when would it >> be? >> >> Thank you in advance for your consideration. >> >> Yours truly, >> Dennis Lee >> --------------------------------------- >> Seong-Yeon Lee >> Graduate Student >> Laboratory of Genomics & Genomic Medicine >> Lee Gil Ya Cancer and Diabetes Institute >> Gachon University of Medicine and Science >> >> Tel : +82 32 899 6545 >> Fax : +82 32 899 6519 >> Mobile : +82 10 7530 7004 >> e-mail : [email protected] >> --------------------------------------- >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> > > > > > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
