Thanks Matt, Now it went fine with the data of CM!! Thanks so much for your help!
Best, Ikko 2014-10-17 21:08 GMT+09:00 Glasser, Matthew <[email protected]>: > You might try making sure you have the latest version of the GIFTI > matlab toolbox (http://www.artefact.tk/software/matlab/gifti/) and of > Connectome Workbench. > > Peace, > > Matt. > > From: 木村一皓 <[email protected]> > Date: Friday, October 17, 2014 at 12:52 AM > To: Matt Glasser <[email protected]> > Cc: "[email protected]" <[email protected]> > Subject: Re: [HCP-Users] How to do network analysis from resting-state > fMRI data? > > Dear Matt, > > Thanks for your answer, and sorry for my slow reply. > Following your advise, I typed as follows in matlab (If I've done the > wrong thing, please correct me); > > > [cii]=ciftiopen('path_to_next/netmats/HCP500_Parcellation_Timeseries_Netmats/netmats/3T_Q1-Q6related468_MSMsulc_d300_ts2_netmat1/100307.pconn.nii','path_to_next/workbench/bin_rh_linux64/wb_command'); > > then came following error > Unable to load library icui18n "Cannot load library icui18n: (icui18n: > cannot open shared object file: No such file or directory)" > Elapsed time is 0.333772 seconds. > Error using struct > Too many input arguments. > Error in gifti>giftistruct (line 93) > s = struct(... > Error in gifti (line 71) > this = read_gifti_file_standalone(varargin{1},giftistruct); > Error in ciftiopen (line 16) > cifti = gifti([tmpname '.gii']); > > > Do you have any idea what's going on and what should I do? > > > Best, > Ikko > > 2014-10-14 2:11 GMT+09:00 Glasser, Matthew <[email protected]>: > >> See the e-mail I forwarded to the list entitled: [HCP-Users] FW: >> Converting/analysing preprocessed rfMRI grayordinates for reading in >> .pconn.nii files into matlab. >> >> Peace, >> >> Matt. >> >> From: 木村一皓 <[email protected]> >> Date: Monday, October 13, 2014 at 2:11 AM >> To: "[email protected]" <[email protected]> >> Subject: [HCP-Users] How to do network analysis from resting-state fMRI >> data? >> >> Dear all, >> >> I'm now trying to do some analysis from resting-state fMRI of HCP >> data. I recently realized that HCP has released the data of matrices >> (netmats), and thought this would help, which leads to folloiwing questions. >> >> My questions are: >> 1. First of all, can I do network analysis from netmats? >> 2. If so, I would like to get Connectivity Matrices readable in matlab. >> Can I do this from ".pconnn.niii"? If I can, what should I do? >> 3. I first thought that I'd like to get CM with nodes of AAL, and DPARSF >> would help in this case, which I found was wrong from recent post. Then >> what software would be recommended to do this? >> >> Best, >> Ikko >> >> _______________________________________________ >> HCP-Users mailing list >> [email protected] >> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >> >> >> ------------------------------ >> >> The materials in this message are private and may contain Protected >> Healthcare Information or other information of a sensitive nature. If you >> are not the intended recipient, be advised that any unauthorized use, >> disclosure, copying or the taking of any action in reliance on the contents >> of this information is strictly prohibited. If you have received this email >> in error, please immediately notify the sender via telephone or return mail. >> > > > ------------------------------ > > The materials in this message are private and may contain Protected > Healthcare Information or other information of a sensitive nature. If you > are not the intended recipient, be advised that any unauthorized use, > disclosure, copying or the taking of any action in reliance on the contents > of this information is strictly prohibited. If you have received this email > in error, please immediately notify the sender via telephone or return mail. > _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
