Here's a tar with the relevant data (only 1.6MB ... truncated the fmri to a single volume): https://drive.google.com/folderview?id=0B-jUIqj-goJ9cVJWcGM5d05RTUk&usp=sharing
-Keith On Thu, Apr 23, 2015 at 3:25 PM, Glasser, Matthew <[email protected]> wrote: > That seems like it shouldn’t be happening. Tim C. might need you to > upload that data somewhere so that he can debug. > > There isn’t any downside to using the generic command, but in your > situation it should not be necessary. > > Peace, > > Matt. > > From: Keith Jamison <[email protected]> > Date: Thursday, April 23, 2015 at 3:21 PM > To: "[email protected]" <[email protected]> > Subject: [HCP-Users] Problem with wb_command -volume-parcel-resampling? > dimension mismatch? > > Hi HCPers > > I'm running into an error when running SubcorticalProcessing.sh in the > fMRISurface pipeline. Specifically, when it tries to run: > wb_command -volume-parcel-resampling <fmri_timecourse>.nii.gz > ROIs/ROIs.<voxres>.nii.gz ROIs/Atlas_ROIs.<voxres>.nii.gz .... > > I get an error saying "volume spacing or dimension mismatch". > > I confirmed that <fmri_timecourse> ROIs/ROIs.<voxres> > ROIs/Atlas_ROIs.<voxres> all have the same dimensions and resolution, and I > even tried using just the first volume in <fmri_timecourse> in case the 4th > dimension mismatch was an issue. > > If I use wb_command -volume-parcel-resampling-generic it works just fine. > > 1. Am I misunderstanding the requirements for this command? Or is there > something else going on? > 2. Is there a downside to using -generic? > > I attached a more specific console log. > > Thanks! > -Keith > > _______________________________________________ > HCP-Users mailing list > [email protected] > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > > > ------------------------------ > > The materials in this message are private and may contain Protected > Healthcare Information or other information of a sensitive nature. If you > are not the intended recipient, be advised that any unauthorized use, > disclosure, copying or the taking of any action in reliance on the contents > of this information is strictly prohibited. If you have received this email > in error, please immediately notify the sender via telephone or return mail. > _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
