I would suspect an orientation problem between the current and new parcel volumes, one volume being LPI and the other being RPI, or similar. Do -file-information on all the input files, and look at the orientation fields (or -nifti-information -print-header and compare the sforms).
It has been a while since I implemented that, so I am fuzzy on the details, but -generic was intended to let you move to a different volume space as well as different parcel boundaries. Tim On Thu, Apr 23, 2015 at 3:21 PM, Keith Jamison <[email protected]> wrote: > Hi HCPers > > I'm running into an error when running SubcorticalProcessing.sh in the > fMRISurface pipeline. Specifically, when it tries to run: > wb_command -volume-parcel-resampling <fmri_timecourse>.nii.gz > ROIs/ROIs.<voxres>.nii.gz ROIs/Atlas_ROIs.<voxres>.nii.gz .... > > I get an error saying "volume spacing or dimension mismatch". > > I confirmed that <fmri_timecourse> ROIs/ROIs.<voxres> > ROIs/Atlas_ROIs.<voxres> all have the same dimensions and resolution, and I > even tried using just the first volume in <fmri_timecourse> in case the 4th > dimension mismatch was an issue. > > If I use wb_command -volume-parcel-resampling-generic it works just fine. > > 1. Am I misunderstanding the requirements for this command? Or is there > something else going on? > 2. Is there a downside to using -generic? > > I attached a more specific console log. > > Thanks! > -Keith > > _______________________________________________ > HCP-Users mailing list > [email protected] > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
