Dear Sir,

Thanks for your help, its much appreciated.


Thanks
Vasudev

On 1 March 2016 at 11:56, Stamatios Sotiropoulos <
[email protected]> wrote:

> I am resending the script zipped, as it was removed by the mail system…
>
>
>
>
>
> On 1 Mar 2016, at 10:52, Stamatios Sotiropoulos <
> [email protected]> wrote:
>
> Hi Vasudev
>
> I am attaching the script. In order to run it, it assumes you have some
> global variables (set by the HCP Pipelines) already set. These are
> CARET7DIR and HCPPIPEDIR_Config.
>
> If you don’t have those, then you need to set them at the terminal before
> running the script. You would do:
>
> 1) Copy the attached “WholeBrainFreeSurferTrajectoryLabelTableLut.txt” to
> a folder of your choice, e.g. named “MyLut”.
>
> 2) From the terminal run
>     export HCPPIPEDIR_Config=MyLut
>
> 3) From the terminal run
>     export CARET7DIR=  WBcmdDir
>
>    where WBcmdDir is the directory name where wb_command is installed at.
>
> Cheers
> Stam
>
>
> On 29 Feb 2016, at 16:30, Dev vasu <[email protected]>
> wrote:
>
> Dear Sir,
>
> I have checked all the material and so far the script is not available, if
> in case you have the script please kindly forward it.
>
>
> Thanks
> Vasudev
>
> On 29 February 2016 at 17:29, Stamatios Sotiropoulos <
> [email protected]> wrote:
>
>> Hi
>>
>> This should be included in the HCP course material. Ideally in the future
>> the Connectome Workbench could directly support such functionality.
>>
>> Best
>> Stam
>>
>>
>>
>> On 29 Feb 2016, at 11:51, Dev vasu <[email protected]>
>> wrote:
>>
>>
>>
>> Dear Sir,
>>
>> I would like to visualize DTI eigen vector map on fractional anisotropy
>> in workbench in your slides for DTI analysis, it was mentioned that this
>> was done using script  DTIV1_to_Workbench.sh, could you please provide me
>> some sample example of the script. I have sent the mail earlier but so far
>> no one replied.
>>
>>
>> Thanks
>> Vasudev
>>
>> _______________________________________________
>> HCP-Users mailing list
>> [email protected]
>> http://lists.humanconnectome.org/mailman/listinfo/hcp-users
>>
>>
>>
>
> <WholeBrainFreeSurferTrajectoryLabelTableLut.txt>
> <DTIV1_to_Workbench.sh>
>
>
>
>

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