Hello, I am trying to run palm on cifti data with TFCE to find mean activation
across a group. When I use the -T flag, the program crashed with the error:
Command:
palm -i ${ContrastName}.dtseries.nii -transposedata -d
$LevelThreeFEATDir/design.mat -o $ContrastName -t
/tmp/CtxFGNG/CtxFGNG_Level3_Analysis/desion -T -ise
Error:
0.01% [Design 1/1, Contrast 1/1, Shuffling 1/10000, Modality 1/1]
Saving file: FoodNogo_dat_tstat
Index exceeds matrix dimensions.
Error in palm_tfce (line 77)
elseif plm.Yisvtx(y) || plm.Yisfac(y),
Error in palm_core (line 1680)
Gtfce{y}{m}{c} =
tfcefunc(G{y}{m}{c},y,opts,plm);
Error in palm (line 81)
palm_core(varargin{:});
Alternatively, if I use the same command, but replace -T with -fdr, the program
runs smoothly, so I do not think the problem is with my design files or data
unless they need to be generated in a special way for TFCE using palm. Are
there any recommendation or previous examples of how I can use TFCE on cifti
data using palm?
Any help on this is very appreciated.
Thank you,
Michael
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