Hi Michael,
On Jun 24, 2011, at 7:01 AM, michael bane wrote:
> My hdf5 1.8.7 appears to build okay but my make check fails.
Hmm, where are you running the 'make check'? You should be running it
from the top level of the directory where you built the software (i.e. where
you ran the 'make' command).
Quincey
> This is on a Sci Linux box:
> uname -a
> Linux redqueen.rcs.manchester.ac.uk 2.6.18-238.1.1.el5 #1 SMP Tue Jan 18
> 18:49:37 EST 2011 x86_64 x86_64 x86_64 GNU/Linux
>
> I attach the std out+err from my configure and make steps. And here is the
> detailed error
>
> [mccssmb2@redqueen hdf5-1.8.7]$
> /software/hdf/5/1.8.7/hdf5-1.8.7/test/.libs/lt-testhdf5 -vv -o select 2>&1 |
> less
>
> For help use: /software/hdf/5/1.8.7/hdf5-1.8.7/test/.libs/lt-testhdf5 -help
> Linked with hdf5 version 1.8 release 7
> Testing -- Configure definitions (config)
> Testing -- Encoding/decoding metadata (metadata)
> Testing -- Checksum algorithm (checksum)
> Testing -- Ternary Search Trees (tst)
> Testing -- Memory Heaps (heap)
> Testing -- Skip Lists (skiplist)
> Testing -- Reference Counted Strings (refstr)
> Testing -- Low-Level File I/O (file)
> Testing -- Generic Object Functions (objects)
> Testing -- Dataspaces (h5s)
> *** UNEXPECTED RETURN from H5Fopen is -1 line 188 in th5s.c
> HDF5-DIAG: Error detected in HDF5 (1.8.7) thread 0:
> #000: H5F.c line 1522 in H5Fopen(): unable to open file
> major: File accessability
> minor: Unable to open file
> #001: H5F.c line 1211 in H5F_open(): unable to open file: time = Fri Jun 24
> 12:41:23 2011
> , name = 'th5s.h5', tent_flags = 0
> major: File accessability
> minor: Unable to open file
> #002: H5FD.c line 1086 in H5FD_open(): open failed
> major: Virtual File Layer
> minor: Unable to initialize object
> #003: H5FDsec2.c line 348 in H5FD_sec2_open(): unable to open file: name =
> 'th5s.h5', errno = 2, error mess
> age = 'No such file or directory', flags = 0, o_flags = 0
> major: File accessability
> minor: Unable to open file
> ***cannot open the pre-created H5S_MAX_RANK test file (th5s.h5)
> Testing -- Dataspace coordinates (coords)
> Testing -- Shared Object Header Messages (sohm)
> Testing -- Attributes (attr)
> Testing -- Selections (select)
> large cube read from small cube has bad data! Line=2015
> large cube read from small cube has bad data! Line=2015
> large cube read from small cube has bad data! Line=2015
> large cube read from small cube has bad data! Line=2015
> large cube read from small cube has bad data! Line=2015
> large cube written from small cube has bad data! Line=2256
> large cube written from small cube has bad data! Line=2256
> large cube written from small cube has bad data! Line=2256
> large cube written from small cube has bad data! Line=2256
> large cube written from small cube has bad data! Line=2256
> large cube read from small cube has bad data! Line=2015
> large cube read from small cube has bad data! Line=2015
> {& much more of same}
>
>
> Many thanks, Michael
> <mkb_make.txt><mkb_configure.txt>_______________________________________________
> Hdf-forum is for HDF software users discussion.
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_______________________________________________
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[email protected]
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