On Thu, 18 Mar 2010, Jonathan Gutow wrote: > > On Mar 18, 2010, at 12:35 PM, R. Kent Wenger wrote: > >> On Thu, 18 Mar 2010, Jonathan Gutow wrote: >> >>> Since you've selected your bonds in the connect command just follow >>> that line with >>> >>> color bond blue >>> >>> You can insert your favorite color:) >> >> So you're saying that the color part is an entirely separate command? > Yep. Probably best for you to spend a little time looking at the > scripting documentation: > http://chemapps.stolaf.edu/jmol/docs/
Hmm. If I do this: connect (atomno=442) (atomno=410); connect (atomno=586) (atomno=266); color bond green; I end up with all of the bonds colored green, not just the ones I added. If I make the whole thing one command, I get an error. The documentation makes it look to me like you should be able to have a color option as part of the connect command, but I haven't been able to come up with any syntax that makes that work. I've looked at the documentation, but I'm still having a hard time understanding some of it. More examples would help, at least for me... Kent -- R. Kent Wenger (wen...@cs.wisc.edu, 608-262-6627, http://www.cs.wisc.edu/~wenger/) Computer Sciences Department University of Wisconsin-Madison ------------------------------------------------------------------------------ Download Intel® Parallel Studio Eval Try the new software tools for yourself. Speed compiling, find bugs proactively, and fine-tune applications for parallel performance. See why Intel Parallel Studio got high marks during beta. http://p.sf.net/sfu/intel-sw-dev _______________________________________________ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers
