I vote for bug-fix and inclusion in 12.0 Jonathan On Jun 29, 2011, at 1:35 PM, Angel Herráez wrote:
> Dear developers, > > I have committed code that updates the definition of the 'carbohydrate' atom > set. This is > based on a list of residue IDs (provided by Eric some time ago). > > While working with some glycans in glycoproteins, I have found out a few > common residues > (N-acetyl-galactosamine and sialic acid) that were not included in the set, > so I have added > them in the list. > > While doing that, I reviewed the whole list against the PDB "Ligand Expo" > site, http://ligand- > expo.rcsb.org/ld-search.html and found out > - that some listed residue IDs are now deprecated from the PDB. I have still > left them in the > list but have separated them and included a comment (in case we want to > remove them in > future) > - that two listed residue IDs were not carbohydrates (maybe a typo), so I > have removed them > > The list will now be documented at http://wiki.jmol.org/index.php/AtomSets > > > Now my question: > I'd like to introduce this change too in the 12.0.x series. Do you think it > qualifies as a bug fix > and so it can go there, or is it a change in behaviour and it should only go > in the 12.1.x? > > Thanks for your views > Angel > > > > > ------------------------------------------------------------------------------ > All of the data generated in your IT infrastructure is seriously valuable. > Why? It contains a definitive record of application performance, security > threats, fraudulent activity, and more. Splunk takes this data and makes > sense of it. IT sense. And common sense. > http://p.sf.net/sfu/splunk-d2d-c2 > _______________________________________________ > Jmol-developers mailing list > Jmol-developers@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/jmol-developers Dr. Jonathan H. Gutow Chemistry Department gu...@uwosh.edu UW-Oshkosh Office: 920-424-1326 800 Algoma Boulevard FAX:920-424-2042 Oshkosh, WI 54901 http://www.uwosh.edu/facstaff/gutow ------------------------------------------------------------------------------ All of the data generated in your IT infrastructure is seriously valuable. Why? It contains a definitive record of application performance, security threats, fraudulent activity, and more. Splunk takes this data and makes sense of it. IT sense. And common sense. http://p.sf.net/sfu/splunk-d2d-c2 _______________________________________________ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers